Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010931.1 Kokia drynarioides strain JFW-HI SEQ_125899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  144993

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3387--3425
16
2.4
16
95
0
69
28
35
23
12
1.91
14025--14238
105
2.0
105
86
0
293
33
7
4
54
1.50
15859--15897
21
1.9
21
94
5
71
66
5
0
28
1.12
15844--15904
23
2.7
22
80
19
72
65
4
0
29
1.13
16020--16141
20
5.9
20
80
10
129
70
18
1
9
1.22
16034--16120
12
7.9
11
74
13
65
71
19
1
8
1.18
16020--16151
44
3.1
44
83
8
175
69
19
2
8
1.25
16049--16145
21
4.7
19
76
11
77
71
17
3
8
1.24
16144--16214
22
3.5
19
80
14
72
71
18
4
5
1.22
16144--16180
17
2.1
18
90
5
58
78
16
2
2
0.98
16156--16214
22
2.8
21
82
5
75
72
16
5
5
1.20
16145--16219
21
3.7
21
76
13
77
72
17
4
6
1.23
18308--18340
15
2.2
15
89
10
50
30
0
3
66
1.06
39224--39262
18
2.1
19
85
4
53
20
2
2
74
1.06
39408--39444
7
5.3
7
90
0
56
64
0
0
35
0.94
39759--39820
27
2.3
27
74
0
70
45
1
3
50
1.27
40027--40120
31
2.8
34
71
18
88
50
2
0
47
1.13
40044--40108
29
2.2
30
83
5
78
49
3
0
47
1.17
40343--40380
15
2.4
16
86
8
51
42
0
0
57
0.98
43931--44010
23
3.4
24
75
11
67
12
21
21
45
1.84
50194--50226
16
2.0
17
88
5
50
48
6
0
45
1.27
60230--60255
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62667--62821
45
3.4
45
94
0
274
29
4
17
48
1.67
65787--65854
32
2.1
32
83
0
82
41
25
19
14
1.89
68475--68518
21
2.0
22
82
4
54
27
2
4
65
1.23
69509--69595
40
2.2
40
80
14
99
59
0
4
35
1.18
82643--82701
29
2.0
29
93
0
100
20
8
22
49
1.75
82802--82831
13
2.3
13
94
0
51
33
10
6
50
1.62
84895--84944
11
4.5
11
78
12
50
14
6
24
56
1.60
85814--85848
12
3.0
12
91
4
54
20
8
14
57
1.63
94763--94800
20
2.0
20
89
5
60
28
10
5
55
1.56
96146--96174
2
14.5
2
100
0
58
51
0
0
48
1.00
96983--97045
29
2.2
30
82
5
76
63
6
4
25
1.38
105236--105265
4
7.5
4
100
0
60
23
0
0
76
0.78
135131--135166
18
2.0
19
89
10
58
58
8
16
16
1.61
137179--137226
19
2.5
19
96
0
87
33
6
6
54
1.51

Tables:   1

The End!