Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010933.1 Kokia drynarioides strain JFW-HI SEQ_125901, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  169437

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
775--921
23
6.3
23
82
7
181
12
23
21
42
1.86
15245--15274
15
1.9
16
93
6
53
33
3
3
60
1.30
15319--15362
18
2.5
18
85
3
54
34
15
4
45
1.67
15446--15482
19
1.9
19
88
0
56
48
2
0
48
1.15
15549--15585
16
2.3
16
95
0
65
48
0
2
48
1.15
16940--16993
23
2.4
22
76
14
56
44
0
46
9
1.35
17014--17094
30
2.7
30
83
11
103
49
2
0
48
1.14
17055--17096
21
2.0
21
86
9
59
52
2
0
45
1.13
19412--19454
12
3.7
12
84
6
52
18
16
13
51
1.77
19435--19477
12
3.7
11
84
6
50
25
23
13
37
1.92
23419--23584
23
7.1
24
89
4
198
34
21
23
19
1.96
23490--23574
12
7.3
12
71
21
74
32
21
24
21
1.97
23419--23584
46
3.6
47
86
1
219
34
21
23
19
1.96
23570--23644
11
6.6
11
74
6
60
48
14
13
24
1.80
23464--23610
46
3.2
46
84
0
150
38
19
21
21
1.94
23570--23644
34
2.2
34
80
0
87
48
14
13
24
1.80
23605--23653
23
2.1
23
84
0
62
40
16
18
24
1.90
23611--23665
23
2.4
23
84
0
65
41
16
18
23
1.89
23994--24031
15
2.6
15
87
4
51
15
26
21
36
1.93
31537--31566
5
6.0
5
100
0
60
0
60
0
40
0.97
33566--33595
2
15.0
2
100
0
60
50
0
0
50
1.00
38952--39158
107
1.9
107
90
1
326
38
8
19
33
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50943--51044
41
2.5
41
96
0
186
21
26
7
44
1.79
55809--55841
14
2.4
14
85
5
50
42
3
6
48
1.43
62713--62788
13
5.8
13
72
6
73
31
3
7
56
1.46
62713--62790
26
3.0
26
76
1
93
30
3
7
57
1.45
62763--62838
30
2.6
28
81
10
89
30
5
10
53
1.57
62771--62838
29
2.3
30
84
2
93
29
5
10
54
1.58
85018--85042
11
2.3
11
100
0
50
0
8
0
92
0.40
87371--87434
27
2.4
27
75
0
74
28
3
4
64
1.29
90458--90553
39
2.5
38
77
11
97
46
6
34
12
1.67
95943--95990
21
2.3
21
85
0
60
35
2
6
56
1.36
95956--95994
21
1.9
20
94
5
69
41
0
5
53
1.23
96049--96104
23
2.4
23
85
5
78
53
3
1
41
1.29
97108--97152
14
3.0
15
83
9
56
44
2
0
53
1.13
97108--97153
16
3.0
16
84
9
60
43
4
0
52
1.21
98522--98790
89
3.0
89
96
2
502
39
23
12
23
1.89
104055--104100
2
23.0
2
100
0
92
50
0
0
50
1.00
111901--111945
20
2.2
21
84
7
58
60
4
8
26
1.46
118118--118186
29
2.3
30
80
12
79
52
14
11
21
1.73
120508--120554
24
2.0
25
87
8
71
29
0
0
70
0.88
133880--133910
16
1.9
16
93
0
53
48
6
6
38
1.55
134001--134043
22
1.9
23
85
4
61
34
0
0
65
0.93
134063--134105
18
2.2
20
84
12
54
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148095--148119
12
2.1
12
100
0
50
40
8
0
52
1.31
152614--152663
23
2.1
24
82
10
59
56
4
0
40
1.18
154797--154876
23
3.4
23
94
1
133
30
3
2
63
1.25
158910--158994
17
4.8
17
81
5
80
42
0
4
52
1.22
158909--159069
34
4.6
34
89
2
205
40
0
6
53
1.26
158942--159038
11
8.5
12
73
11
78
38
0
6
55
1.25
158943--159069
17
7.4
16
78
10
119
39
0
6
54
1.26
159843--159880
19
1.9
21
89
10
62
52
0
0
47
1.00
159848--159891
20
2.2
20
84
11
56
56
2
0
40
1.11
160812--161088
29
9.4
29
82
3
322
36
30
1
31
1.68
160812--161078
59
4.5
59
86
2
367
36
30
1
30
1.68
160812--161089
30
9.4
28
79
7
268
36
30
1
31
1.68
164605--164737
70
1.9
67
86
4
185
33
11
12
43
1.77
166580--166613
17
2.0
17
88
11
52
64
2
0
32
1.08
167326--167393
3
22.7
3
100
0
136
33
0
0
66
0.92

Tables:   1

The End!