Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010941.1 Kokia drynarioides strain JFW-HI SEQ_125909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116321

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8252--8303
26
2.0
26
84
0
68
32
0
7
59
1.26
8439--8588
7
20.9
7
69
13
67
29
0
27
43
1.55
9480--9568
43
2.1
43
89
0
133
41
13
13
31
1.83
11343--11382
21
1.9
21
94
0
71
55
12
2
30
1.50
11435--11474
12
3.4
12
82
3
55
70
5
0
25
1.08
11436--11490
23
2.2
26
84
12
80
70
7
0
21
1.11
12834--12887
11
5.2
11
73
26
55
35
0
1
62
1.06
14934--14987
2
27.0
2
100
0
108
0
50
0
50
1.00
19583--19607
12
2.1
12
100
0
50
40
16
28
16
1.89
35455--35568
29
3.9
28
74
7
86
37
4
21
36
1.73
35371--35568
58
3.4
57
78
12
172
35
4
23
36
1.76
37663--38667
206
4.9
205
84
3
1199
22
21
18
36
1.95
38754--39006
39
6.5
39
74
8
212
25
17
31
25
1.97
38754--39006
78
3.2
77
82
4
251
25
17
31
25
1.97
39317--39731
49
8.4
48
73
11
211
16
26
19
38
1.92
39317--39546
97
2.3
100
83
7
283
15
26
19
38
1.91
39419--39693
146
1.9
148
82
5
351
16
25
21
36
1.94
39580--39775
100
2.0
100
90
0
311
16
25
20
38
1.93
40997--41031
16
2.2
16
89
0
52
2
11
0
85
0.69
40992--41034
23
1.9
22
90
4
68
2
13
0
83
0.74
41835--41912
36
2.2
36
95
0
138
12
19
11
56
1.66
46192--46384
96
2.0
97
80
7
214
38
11
18
31
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46732--46889
58
2.8
56
80
12
160
32
3
27
36
1.73
46798--46889
30
3.1
29
77
12
98
39
2
20
38
1.65
46793--46876
29
3.0
27
78
13
80
35
1
23
39
1.63
46807--46912
30
3.6
29
73
14
83
33
1
22
41
1.65
48723--48802
17
4.4
17
77
16
88
58
1
1
38
1.14
48744--48786
22
2.0
22
85
0
59
62
2
0
34
1.08
54715--54747
14
2.3
15
85
15
52
57
6
0
36
1.23
54968--55113
58
2.5
55
80
11
168
42
0
2
54
1.16
55286--55340
16
3.4
16
85
5
76
29
23
9
38
1.85
66279--66335
9
6.6
8
76
11
51
70
3
0
26
1.03
67087--67148
31
1.9
33
87
12
94
62
0
9
27
1.26
68493--68552
29
2.1
29
84
6
77
61
3
5
30
1.33
70253--70277
13
1.9
13
100
0
50
44
16
16
24
1.86
70416--70454
12
3.3
12
89
3
62
33
17
0
48
1.48
70417--70450
4
8.8
4
87
6
52
29
20
0
50
1.49
74610--74675
34
1.9
33
82
11
80
66
1
0
31
1.01
74785--74998
93
2.3
93
88
7
305
35
9
17
37
1.82
75332--75364
10
3.3
10
88
12
50
9
0
9
81
0.87
79920--79950
2
15.5
2
100
0
62
51
0
0
48
1.00
90677--90764
46
1.9
46
88
0
131
28
7
21
42
1.81
94124--94313
96
2.0
96
85
2
256
35
15
16
32
1.90
95082--95109
14
2.0
14
100
0
56
42
0
0
57
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98933--98968
15
2.3
16
90
4
56
61
0
2
36
1.11
101078--101104
10
2.7
10
100
0
54
48
0
29
22
1.51
101555--101597
16
2.5
17
81
11
52
46
4
0
48
1.22
106733--106772
11
3.6
11
86
0
62
60
12
7
20
1.56
106726--106768
22
2.0
22
85
0
59
60
13
6
18
1.55
106956--106991
18
1.9
18
88
5
54
44
0
8
47
1.33
108511--108544
18
1.9
17
88
5
50
38
8
11
41
1.73
112834--113016
97
1.9
97
87
2
269
32
16
12
38
1.87
116146--116241
41
2.3
41
92
3
158
32
5
25
37
1.78

Tables:   1

The End!