Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01010957.1 Kokia drynarioides strain JFW-HI SEQ_125925, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 975

Length: 1625
ACGTcount: A:0.17, C:0.17, G:0.16, T:0.29

Warning! 338 characters in sequence are not A, C, G, or T


Found at i:1312 original size:37 final size:37

Alignment explanation


    Indices: 1262--1357  Score: 183
    Period size: 37  Copynumber: 2.6  Consensus size: 37

       1252 TTCAATCTGT

                 *                               
       1262 TTCTCTGTATCTCATCAGGAAGACGAATTTGGTTCAC
          1 TTCTCAGTATCTCATCAGGAAGACGAATTTGGTTCAC

                                                 
       1299 TTCTCAGTATCTCATCAGGAAGACGAATTTGGTTCAC
          1 TTCTCAGTATCTCATCAGGAAGACGAATTTGGTTCAC

                                  
       1336 TTCTCAGTATCTCATCAGGAAG
          1 TTCTCAGTATCTCATCAGGAAG

       1358 CTAACCGTTT


Statistics
Matches: 58,  Mismatches: 1, Indels: 0
        0.98            0.02        0.00

Matches are distributed among these distances:
  37   58  1.00

ACGTcount: A:0.26, C:0.22, G:0.19, T:0.33


Consensus pattern (37 bp):   
TTCTCAGTATCTCATCAGGAAGACGAATTTGGTTCAC
Done.