Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010960.1 Kokia drynarioides strain JFW-HI SEQ_125928, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  192528

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3889--4203
41
7.7
41
80
4
278
20
23
16
40
1.91
3920--4203
82
3.5
82
81
4
340
20
22
16
40
1.91
10314--10388
29
2.5
29
82
8
80
62
5
2
29
1.31
11572--11628
16
3.6
16
77
13
55
47
24
8
19
1.77
33534--33573
21
1.9
21
90
10
64
0
32
0
67
0.91
52203--52439
118
2.0
118
99
0
465
35
15
18
30
1.92
58446--58477
16
2.0
16
100
0
64
43
6
12
37
1.68
58834--58897
21
3.0
22
86
4
87
45
14
9
31
1.76
62973--63076
52
2.0
52
98
0
199
36
18
25
20
1.94
73432--73489
29
2.0
29
89
0
89
31
25
13
29
1.94
87731--87780
16
3.5
14
84
12
66
44
0
0
56
0.99
87723--87796
29
2.5
30
80
2
96
51
0
0
48
1.00
88541--88581
21
2.0
21
85
0
55
19
34
2
43
1.64
88892--88935
20
2.2
20
92
8
72
56
0
0
43
0.99
88891--88933
9
4.4
10
88
11
63
58
0
0
41
0.98
88925--88967
22
2.1
21
87
12
63
55
0
0
44
0.99
88901--88973
20
3.7
20
76
22
73
50
1
0
47
1.09
90488--90541
21
2.6
21
79
5
65
29
11
25
33
1.91
105497--105597
7
15.0
7
71
15
54
17
17
23
40
1.91
105493--105568
27
2.8
27
82
7
100
17
14
25
43
1.86
105504--105548
20
2.2
20
92
0
72
17
13
26
42
1.86
107312--107354
17
2.6
16
82
10
52
23
6
34
34
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112834--112883
7
7.3
7
84
4
57
16
22
26
36
1.94
112834--112884
14
3.7
14
86
2
68
15
21
25
37
1.93
112836--112883
21
2.3
20
86
13
71
14
20
27
37
1.92
122069--122267
59
3.4
57
75
10
175
38
2
23
36
1.66
122100--122296
30
6.6
30
77
7
179
38
1
23
37
1.64
122104--122296
60
3.2
60
77
10
207
38
1
21
37
1.63
124219--124263
7
6.4
7
94
0
81
0
57
0
42
0.98
125586--125624
18
2.0
20
85
9
55
41
0
2
56
1.13
129169--129225
29
2.0
29
100
0
114
22
24
42
10
1.85
132117--132162
24
1.9
24
82
8
58
34
0
8
56
1.30
132960--132988
10
2.9
10
100
0
58
0
68
20
10
1.18
138539--138563
12
2.1
12
100
0
50
16
0
8
76
1.02
141709--141733
2
12.5
2
100
0
50
48
0
0
52
1.00
143166--143215
18
2.8
18
76
11
57
32
12
18
38
1.87
143862--143914
26
2.0
26
96
0
97
39
9
26
24
1.86
154080--154118
13
3.0
12
85
14
51
79
0
2
17
0.84
155285--155376
21
4.4
21
91
0
139
27
11
15
45
1.81
163106--163209
36
2.9
36
85
1
154
39
13
25
21
1.90
166849--166886
15
2.6
15
80
19
53
78
0
2
18
0.86
172452--172537
43
2.0
43
97
0
163
33
20
15
30
1.93
179836--179906
37
1.9
37
82
5
90
18
19
19
42
1.90
179896--180435
204
2.7
202
88
2
800
21
21
20
35
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191026--191210
96
1.9
96
82
8
234
37
14
17
29
1.90
191488--191897
29
14.0
29
75
8
289
34
3
27
33
1.75
191498--191969
117
4.0
117
76
7
395
34
4
26
34
1.76
191590--191964
30
12.7
29
77
7
292
36
3
25
34
1.72
191590--191965
59
6.4
58
81
7
355
36
3
25
35
1.72

Tables:   1

The End!