Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010962.1 Kokia drynarioides strain JFW-HI SEQ_125930, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61800

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--196
17
3.1
17
65
34
50
45
6
13
34
1.69
1872--1972
49
2.0
49
82
3
121
57
18
8
14
1.63
1763--2816
353
3.0
352
91
3
1629
46
15
14
22
1.82
3540--4358
409
2.0
406
97
0
1548
33
19
19
27
1.96
4409--4556
69
2.2
68
95
2
262
43
10
21
25
1.84
4524--4574
18
2.8
18
100
0
102
29
11
33
25
1.91
4455--4625
87
1.9
89
90
3
274
42
9
22
24
1.84
4560--4722
54
3.0
52
86
7
220
49
7
17
26
1.72
5546--5594
25
2.0
24
84
4
62
63
0
4
32
1.13
7539--7731
52
3.7
52
82
0
251
27
15
24
32
1.95
7536--7728
104
1.9
104
86
0
278
27
15
24
32
1.96
9538--9562
2
12.5
2
100
0
50
52
0
0
48
1.00
10811--10846
16
2.1
18
90
10
58
11
0
33
55
1.35
21902--21966
22
3.0
22
76
0
67
64
18
9
7
1.46
27645--27670
4
6.5
4
100
0
52
50
23
0
26
1.50
28590--28627
10
3.7
10
86
13
51
36
0
2
60
1.11
29397--29446
21
2.4
22
80
10
68
58
2
0
40
1.10
30946--30975
2
15.0
2
100
0
60
50
0
0
50
1.00
31533--32262
374
2.0
374
96
0
1343
26
16
21
35
1.94
33357--33394
20
1.9
20
88
0
58
0
60
0
39
0.97
33518--33548
13
2.4
13
94
0
53
0
64
0
35
0.94
38771--38954
52
3.5
52
83
2
244
34
23
16
25
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40237--40266
12
2.4
13
94
5
53
56
0
6
36
1.26
43019--43069
21
2.4
21
93
0
84
33
7
21
37
1.82
44865--44903
21
1.9
21
89
5
62
25
5
35
33
1.78
45969--46025
27
2.1
27
86
0
78
40
3
10
45
1.56
47899--47931
17
1.9
18
88
11
52
60
0
3
36
1.12
50311--50348
18
2.1
18
90
9
60
60
5
5
28
1.40
51810--51855
19
2.5
19
82
6
60
73
4
0
21
1.00
51811--51878
9
7.8
9
74
12
61
75
4
0
20
0.98
51820--51878
17
3.4
17
83
9
66
76
5
0
18
0.97
61561--61602
20
2.1
20
100
0
84
57
14
9
19
1.64

Tables:   1

The End!