Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010964.1 Kokia drynarioides strain JFW-HI SEQ_125932, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47682

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--123
63
2.0
63
100
0
246
24
24
20
30
1.98
6252--6338
30
3.0
29
76
15
99
4
10
43
41
1.59
6230--6338
57
1.9
57
82
0
137
9
11
39
39
1.74
6251--6347
30
3.3
30
74
11
85
6
9
44
40
1.62
14206--14312
28
3.9
27
79
6
124
25
13
24
37
1.91
14206--14335
28
4.7
28
76
10
99
24
14
24
36
1.93
14300--14367
26
2.6
26
83
6
75
16
20
23
39
1.91
15237--15280
23
1.9
23
81
9
54
22
15
13
47
1.81
15465--15745
7
39.9
7
67
11
83
26
7
27
39
1.82
15701--15755
28
2.0
28
96
0
101
29
0
30
40
1.57
15565--15879
121
2.6
122
85
5
413
25
8
28
37
1.85
15834--15878
14
3.2
14
83
0
63
26
6
28
37
1.82
19125--19162
20
1.9
20
88
0
58
36
28
7
26
1.84
22689--22742
26
2.0
27
85
3
74
62
1
1
33
1.16
23264--23296
16
2.0
17
88
5
50
51
0
0
48
1.00
25572--25599
5
5.6
5
100
0
56
0
17
21
60
1.36
27714--27777
21
3.0
21
76
2
65
25
18
25
31
1.98
36531--36638
25
4.1
25
70
17
74
55
10
11
23
1.65
36525--36653
56
2.3
56
82
2
143
54
9
10
25
1.65
38153--38195
16
2.8
16
85
3
52
32
2
6
58
1.38
41701--41764
32
2.0
32
81
6
76
53
10
3
32
1.52
42459--42485
5
5.4
5
100
0
54
37
0
62
0
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45334--45365
16
1.9
17
93
6
57
40
0
3
56
1.15
45311--45375
17
3.8
17
76
15
71
38
0
1
60
1.07
45425--45661
130
1.8
128
84
3
323
46
7
13
32
1.71

Tables:   1

The End!