Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011015.1 Kokia drynarioides strain JFW-HI SEQ_125986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61894

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2283--2419
45
3.0
45
88
0
193
34
26
18
20
1.96
3754--3890
45
3.0
45
88
0
193
34
26
18
20
1.96
3952--4236
142
2.0
142
96
0
525
31
20
17
30
1.96
4312--4403
28
3.3
28
84
3
114
46
25
6
21
1.75
7231--7262
15
2.1
15
100
0
64
28
12
12
46
1.78
8675--8735
30
2.0
30
90
0
95
21
22
1
54
1.54
11336--11415
29
2.7
29
86
9
90
31
6
15
47
1.70
11357--11415
29
2.0
30
93
3
102
28
6
15
49
1.70
11361--11424
29
2.2
29
86
8
85
31
9
12
46
1.73
11707--11781
31
2.4
32
82
6
82
49
4
5
41
1.44
17976--18028
20
2.7
18
75
16
52
35
1
7
54
1.40
22240--22656
141
3.0
141
80
4
452
27
17
21
33
1.96
22286--22668
141
2.7
140
80
3
457
27
18
21
32
1.97
23115--23186
28
2.6
26
77
16
74
47
30
2
19
1.64
23510--23551
16
2.6
16
88
3
57
38
0
7
54
1.28
27111--27138
2
14.0
2
100
0
56
50
0
50
0
1.00
27733--27760
6
4.7
6
100
0
56
0
14
67
17
1.22
29813--29841
2
14.5
2
100
0
58
48
0
0
51
1.00
57450--57500
26
2.0
26
84
3
68
19
5
3
70
1.24
57451--57506
26
2.2
26
80
6
60
19
7
3
69
1.27
58993--59041
25
2.0
25
84
11
66
65
10
0
24
1.23
60059--60090
3
10.7
3
100
0
64
31
68
0
0
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60721--60745
10
2.5
10
100
0
50
0
0
16
84
0.63
61861--61894
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!