Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011017.1 Kokia drynarioides strain JFW-HI SEQ_125988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81664

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
637--693
9
6.1
9
83
4
51
1
17
1
78
0.91
642--694
10
5.7
9
78
14
54
0
15
1
83
0.74
644--694
14
3.6
14
86
7
68
0
15
1
82
0.76
10703--10744
21
2.0
22
86
9
61
54
16
7
21
1.65
11623--11696
30
2.4
30
79
6
76
29
16
13
40
1.86
11623--11696
32
2.4
30
81
6
85
29
16
13
40
1.86
14963--15052
45
2.0
45
100
0
180
22
33
4
40
1.74
16012--16048
16
2.4
16
86
8
51
21
2
37
37
1.68
27606--27640
17
2.1
17
94
0
61
48
5
20
25
1.71
30993--31040
22
2.2
23
77
11
55
35
4
0
60
1.16
31327--31446
52
2.3
52
81
2
143
21
28
1
48
1.60
31357--31392
18
1.9
19
88
5
56
27
22
0
50
1.50
32373--32452
39
2.0
40
87
2
117
30
18
20
31
1.96
58299--58345
18
2.6
18
89
0
76
25
6
14
53
1.65
59396--59423
2
14.0
2
100
0
56
0
50
0
50
1.00
63541--63581
15
2.8
15
82
10
50
29
0
9
60
1.28
64279--64314
19
1.9
19
88
5
56
8
2
13
75
1.15
67067--67126
28
2.1
28
96
0
111
58
20
6
15
1.59
68091--68141
21
2.5
21
77
3
59
33
7
21
37
1.82
68691--68742
26
2.0
26
84
3
68
42
19
1
36
1.62
70617--70689
20
3.7
20
71
14
69
41
8
9
41
1.68
70616--70692
40
1.9
40
89
0
118
42
7
10
38
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72933--72976
22
2.0
22
100
0
88
40
18
4
36
1.71
80552--80650
41
2.4
42
87
1
146
32
19
32
16
1.94
80628--80674
24
2.0
24
100
0
94
34
27
29
8
1.87

Tables:   1

The End!