Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011030.1 Kokia drynarioides strain JFW-HI SEQ_126001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12405

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
977--1052
23
3.4
22
83
5
80
13
23
26
36
1.91
2001--2052
3
17.0
3
88
4
77
63
3
1
30
1.23
3190--3390
59
3.4
58
84
5
235
35
20
3
39
1.71
3202--3535
29
11.4
29
69
11
166
32
23
3
40
1.72
3378--3535
59
2.8
56
72
18
137
31
24
3
41
1.72
3318--3594
89
3.2
87
82
6
242
31
24
3
40
1.74
3371--3595
86
2.6
88
80
6
244
29
25
4
40
1.74
3510--3623
58
2.0
58
83
10
144
28
27
2
41
1.69
3924--4120
97
2.0
98
82
6
240
31
17
13
38
1.88
4985--5018
16
2.1
17
88
5
52
50
0
0
50
1.00
5186--5225
21
1.9
21
84
0
53
37
0
15
47
1.45
7031--7086
6
9.5
6
77
11
53
28
21
0
50
1.49
7050--7086
18
2.1
18
94
0
65
24
24
0
51
1.49
9974--10037
24
2.7
24
92
0
101
54
7
12
25
1.64

Tables:   1

The End!