Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011032.1 Kokia drynarioides strain JFW-HI SEQ_126003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24904

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2544--2638
17
5.5
17
75
6
75
38
4
6
50
1.47
2544--2632
34
2.6
35
76
13
96
38
4
5
51
1.46
3292--3321
3
10.0
3
100
0
60
66
0
0
33
0.92
3320--3351
3
10.7
3
93
0
55
34
3
31
31
1.73
4569--5006
29
14.9
29
69
16
201
34
24
3
37
1.74
4581--4653
30
2.5
30
82
10
98
36
20
5
36
1.76
4636--5034
59
6.8
60
81
9
387
34
25
3
36
1.73
4636--5006
117
3.2
113
82
8
413
34
25
2
37
1.71
4990--5062
29
2.6
29
80
10
87
32
24
9
32
1.88
5305--5480
97
1.8
97
83
4
239
28
18
13
39
1.89
13664--13889
113
2.0
112
97
0
425
34
15
18
30
1.92
16924--17966
201
5.2
201
90
0
1523
35
18
22
23
1.95
18273--18367
17
5.5
17
74
8
77
37
4
7
50
1.50
19030--19061
3
10.7
3
100
0
64
68
0
0
31
0.90
20194--20504
30
10.5
31
70
20
213
35
25
1
37
1.66
20198--20504
59
5.2
59
82
9
371
35
24
1
37
1.66
20198--20579
59
6.6
58
80
11
365
35
25
3
36
1.72
20138--20565
30
14.7
30
70
18
160
35
25
3
36
1.73
20481--20566
29
3.0
29
79
5
86
32
24
8
34
1.85
23826--23873
21
2.3
21
81
0
60
58
2
10
29
1.43
24878--24904
4
6.8
4
100
0
54
51
22
0
25
1.48

Tables:   1

The End!