Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011033.1 Kokia drynarioides strain JFW-HI SEQ_126004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28464

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
544--696
30
5.1
29
72
12
112
33
28
1
36
1.66
566--690
30
4.2
29
78
10
119
32
27
1
38
1.66
548--696
60
2.5
59
77
8
158
34
26
1
36
1.65
647--869
59
3.7
58
78
7
223
31
25
7
36
1.83
4130--4211
42
1.9
44
87
5
123
32
3
10
52
1.54
4898--5024
41
3.1
39
83
7
155
36
18
15
29
1.92
6843--6910
6
11.7
6
71
22
56
48
2
0
48
1.16
6844--6889
17
2.8
16
87
9
65
47
2
0
50
1.13
6881--6926
24
1.9
24
86
8
67
52
4
2
41
1.33
7685--7757
17
4.4
17
81
8
87
45
1
2
50
1.24
7678--7757
34
2.4
33
85
6
108
46
1
3
48
1.28
7759--7799
13
3.2
14
80
19
54
56
19
7
17
1.64
7805--7853
15
3.3
15
82
0
62
44
30
10
14
1.78
8486--8544
19
3.0
19
78
14
66
57
1
3
37
1.25
9598--9810
29
7.3
30
73
13
194
35
24
2
37
1.69
9587--9844
58
4.4
59
87
6
350
36
24
2
36
1.70
9587--9844
117
2.2
117
89
6
398
36
24
2
36
1.70
17619--19104
748
2.0
738
100
0
2882
33
17
22
25
1.96
22300--23254
200
4.7
202
82
7
1065
36
20
22
20
1.95
23588--23660
17
4.4
17
84
1
94
43
1
2
52
1.24
23593--23641
6
8.5
6
76
17
50
40
0
4
55
1.19
23582--23660
34
2.4
33
84
2
104
44
1
3
50
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23692--23746
15
3.7
15
92
0
92
43
29
9
18
1.80
23692--23756
30
2.2
30
91
0
103
41
30
10
16
1.83
23692--23756
15
4.3
15
90
0
85
41
30
10
16
1.83
24301--24386
3
28.7
3
100
0
172
66
0
0
33
0.92
24453--24513
19
3.2
19
88
6
88
55
1
1
40
1.19
25565--25820
30
8.7
30
78
10
251
37
25
1
35
1.64
25567--25823
58
4.4
58
87
2
356
37
25
1
35
1.66
25567--25820
59
4.4
59
88
1
343
37
25
1
35
1.64

Tables:   1

The End!