Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011048.1 Kokia drynarioides strain JFW-HI SEQ_126019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54506

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1272--1532
142
1.8
142
94
0
468
37
13
21
27
1.91
2307--2346
15
2.7
15
88
0
53
32
5
10
52
1.56
2616--2666
19
2.6
20
81
9
61
58
1
3
35
1.28
4511--4535
10
2.5
10
100
0
50
80
0
0
20
0.72
17423--17463
20
2.0
21
85
4
57
14
7
0
78
0.96
17945--18136
96
2.0
95
87
8
273
38
14
18
28
1.90
18401--18780
29
12.9
28
80
9
182
30
2
30
36
1.71
18430--18779
30
12.0
29
86
6
433
29
2
30
36
1.72
18431--18778
59
5.9
58
85
6
416
29
2
30
36
1.72
19847--19888
15
2.5
18
88
11
63
38
4
0
57
1.20
20547--20626
17
4.7
17
88
0
124
53
2
0
43
1.14
20534--20581
23
2.1
23
92
7
80
52
2
0
45
1.12
20534--20591
10
5.8
10
74
22
59
53
1
0
44
1.10
20539--20596
23
2.5
23
86
5
73
55
1
0
43
1.10
20541--20626
6
15.0
6
73
18
76
53
2
0
44
1.13
20991--21061
37
1.9
37
82
0
88
19
21
19
39
1.93
21058--21416
193
1.8
198
85
6
507
23
23
18
35
1.96
21271--21652
115
3.3
116
76
7
344
21
22
19
36
1.95
21469--22021
201
2.7
204
83
5
702
22
21
19
36
1.95
33746--33806
28
2.1
28
84
3
77
24
6
29
39
1.80
33794--34142
30
11.7
29
86
5
430
32
2
29
36
1.69
33760--34146
89
4.4
88
84
8
434
31
2
30
35
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35918--35986
6
12.0
6
75
14
65
53
2
0
43
1.15
35911--35956
23
2.0
22
95
4
83
54
2
0
43
1.12
35924--35986
17
3.7
17
89
0
99
53
3
0
42
1.16
36534--36611
23
3.4
23
92
5
124
44
6
0
48
1.28
36673--36715
20
2.2
20
84
16
54
53
2
2
41
1.26
36746--36794
21
2.3
21
85
0
62
53
0
0
46
1.00
38229--38274
19
2.4
18
85
10
56
73
2
0
23
0.94
45038--45075
18
2.1
19
85
5
51
47
15
13
23
1.81
47316--47370
20
2.8
20
74
0
56
72
3
3
20
1.15
47358--47394
9
4.4
9
83
16
53
70
0
0
29
0.88
47360--47393
16
2.2
15
94
5
59
67
0
0
32
0.91
47410--47495
10
9.6
9
72
14
54
63
2
2
31
1.19
47402--47461
27
2.1
29
81
9
70
66
3
1
28
1.17
47425--47494
26
2.7
26
75
18
65
61
2
2
32
1.25
48124--48173
26
1.9
26
92
8
84
32
0
2
66
1.03
48122--48214
45
2.1
44
86
6
125
31
1
2
65
1.11
48122--48214
9
10.4
9
68
22
54
31
1
2
65
1.11
48124--48213
17
5.2
17
71
14
58
32
1
2
64
1.13
52140--52181
21
2.2
20
87
12
61
64
0
2
33
1.07
54337--54458
23
5.2
23
71
19
67
39
22
25
13
1.90

Tables:   1

The End!