Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011059.1 Kokia drynarioides strain JFW-HI SEQ_126030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  143208

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1534--1613
36
2.2
36
86
0
106
22
25
15
37
1.93
4146--4199
19
2.9
18
78
5
63
31
7
1
59
1.36
11398--11438
2
20.5
2
94
0
73
51
0
48
0
1.00
24485--24526
21
2.0
22
85
4
59
64
0
0
35
0.94
26260--26361
45
2.2
48
75
18
108
26
0
11
60
1.37
29921--30043
23
5.3
23
77
5
113
13
20
21
44
1.85
29941--30090
69
2.1
69
80
9
162
13
18
20
47
1.82
33049--33099
25
2.0
26
82
14
63
7
21
0
70
1.12
34399--34452
26
2.1
26
96
0
99
18
14
20
46
1.84
39918--39974
15
3.6
15
73
13
51
15
64
1
17
1.37
39890--39974
33
2.6
32
78
9
82
16
62
2
18
1.43
48511--48549
19
2.1
19
85
0
51
35
5
15
43
1.69
57032--57078
22
2.1
22
88
0
67
10
27
17
44
1.81
64905--64961
29
1.9
30
89
3
89
35
1
8
54
1.42
88520--88553
18
1.9
17
94
5
59
0
29
11
58
1.33
92820--92901
31
2.6
33
79
13
82
36
1
1
60
1.12
92838--92897
23
2.7
22
77
7
59
33
0
1
65
1.03
101560--101612
4
13.2
4
80
7
54
64
0
35
0
0.94
101560--101612
15
3.3
15
80
12
61
64
0
35
0
0.94
101564--101612
20
2.5
20
83
9
73
63
0
36
0
0.95
101688--101785
33
3.2
33
67
21
104
36
4
10
48
1.56
101666--101785
58
2.1
58
100
0
240
35
3
8
53
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105124--105257
45
3.0
45
87
2
180
20
22
26
31
1.98
107176--107222
16
3.1
16
74
20
55
36
0
4
59
1.17
107485--107527
21
2.1
21
86
4
61
60
11
2
25
1.43
115641--115752
56
2.0
56
100
0
224
44
5
7
42
1.54
122371--122413
12
3.5
12
84
6
50
39
2
6
51
1.42
129495--129532
20
1.9
19
100
0
67
0
5
5
86
0.62
136897--136968
22
3.2
22
70
22
60
26
5
12
55
1.58
138266--138307
6
7.0
6
100
0
84
33
0
0
66
0.92
138649--138756
31
3.6
30
71
14
87
26
18
10
44
1.82
138649--138835
60
3.1
61
80
4
211
25
16
11
46
1.81
138661--138819
59
2.7
58
84
2
192
25
18
10
45
1.81
138997--139155
80
2.0
78
84
4
203
50
10
13
25
1.74
139228--139254
3
9.0
3
100
0
54
66
0
0
33
0.92
141091--141162
22
3.2
22
70
22
60
26
5
12
55
1.58
141424--143208
909
2.0
899
100
0
3480
34
14
15
34
1.89

Tables:   1

The End!