Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011098.1 Kokia drynarioides strain JFW-HI SEQ_126071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44650

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
868--920
15
3.4
15
77
10
61
62
11
1
24
1.39
13148--13434
148
1.9
149
87
2
416
26
22
15
35
1.94
13267--13621
93
3.8
93
75
9
236
26
24
16
32
1.96
13440--13927
93
5.2
93
74
9
405
25
21
17
35
1.95
20267--20300
15
2.3
15
90
5
52
35
38
5
20
1.77
21594--21806
59
3.6
58
78
3
212
32
23
4
39
1.74
21594--21806
30
7.2
30
79
6
184
32
23
4
39
1.74
21616--21812
29
6.7
29
74
9
107
31
21
4
42
1.72
28670--28746
39
2.0
39
92
0
127
44
15
25
14
1.84
29494--30157
50
13.4
50
75
7
230
35
17
30
16
1.93
29523--30202
149
4.6
149
75
7
465
35
16
30
16
1.92
29523--30187
99
6.7
98
75
8
503
35
16
30
17
1.92
30685--30718
15
2.3
15
90
5
52
35
38
5
20
1.77
31422--31489
35
1.9
36
82
8
86
66
1
5
26
1.23
32216--32415
30
6.7
30
78
8
230
37
21
1
40
1.63
32223--32415
60
3.3
59
84
6
257
36
22
1
40
1.61
32223--32442
60
3.7
56
81
10
226
34
23
1
40
1.65
36044--36370
41
8.0
41
78
4
293
31
19
29
19
1.97
36004--36359
82
4.4
81
78
3
331
32
19
28
19
1.97
36055--36370
123
2.6
123
82
2
366
31
19
29
19
1.97
36042--36369
82
4.0
82
80
2
338
30
20
29
19
1.97
42350--42722
43
8.3
42
78
10
280
21
17
27
32
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42355--42667
91
3.5
92
80
6
291
22
17
28
31
1.97
42590--42715
49
2.6
48
87
1
180
23
20
24
30
1.98

Tables:   1

The End!