Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011108.1 Kokia drynarioides strain JFW-HI SEQ_126081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  166255

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
388--537
23
6.4
23
78
10
128
14
21
20
44
1.86
367--539
23
7.5
20
73
19
76
13
22
19
44
1.85
3194--3238
24
1.9
23
81
4
54
33
6
4
55
1.46
3201--3251
23
2.2
24
82
10
61
29
5
1
62
1.29
23579--23622
2
22.5
2
95
4
81
52
0
0
47
1.00
38018--38076
28
2.1
28
81
9
68
38
0
0
61
0.96
38412--38464
27
2.0
27
92
0
88
18
0
11
69
1.17
38517--38572
25
2.3
24
87
3
76
28
0
3
67
1.07
38997--39054
18
3.1
18
70
18
55
36
1
0
62
1.06
40909--41012
22
4.7
21
75
16
86
75
0
19
2
0.97
40933--40968
17
2.2
16
90
9
56
83
0
13
0
0.61
40909--41009
23
4.3
23
71
14
73
76
0
18
2
0.97
43795--43874
20
4.2
20
71
20
64
63
0
7
28
1.21
43795--43836
21
2.0
20
86
4
57
66
0
7
26
1.17
43812--43860
19
2.7
17
80
20
55
67
0
4
28
1.09
43798--43872
17
4.0
19
70
20
59
64
0
5
30
1.16
50631--50703
33
2.2
33
83
7
87
49
13
5
31
1.65
62321--62349
6
4.8
6
100
0
58
51
13
34
0
1.42
63725--63814
45
2.0
45
100
0
180
37
8
26
26
1.86
90000--90048
2
25.0
2
95
4
91
51
0
0
48
1.00
94366--94410
24
1.9
23
86
4
63
37
4
0
57
1.19
94366--94409
23
1.9
23
81
9
54
38
4
0
56
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94621--94669
23
2.1
23
81
11
55
18
2
14
65
1.37
96612--96845
110
2.1
110
88
3
337
32
22
17
27
1.96
100128--100199
30
2.4
30
86
6
92
48
20
12
18
1.80
102061--102094
17
2.0
17
88
0
50
73
0
23
2
0.97
102119--102150
12
2.7
12
100
0
64
31
0
0
68
0.90
102778--102825
16
3.2
16
72
27
59
60
8
0
31
1.26
104721--104812
45
2.0
45
91
0
148
31
28
18
21
1.97
108401--108473
36
2.1
36
85
12
98
46
2
5
45
1.40
112732--112778
24
2.0
24
95
0
85
17
8
4
70
1.29
118100--118132
17
1.9
17
100
0
66
24
18
0
57
1.40
125972--125997
13
2.0
13
100
0
52
0
0
7
92
0.39
127583--127610
6
4.7
6
100
0
56
17
82
0
0
0.68
127924--128152
123
1.8
127
85
7
324
35
14
11
38
1.83
128446--128549
51
2.0
51
81
7
122
42
0
10
46
1.45
130469--130686
109
2.0
109
88
1
321
29
23
16
30
1.96
140078--140155
30
2.5
30
79
12
77
47
0
5
47
1.24
164935--165046
59
1.9
59
96
0
206
28
4
8
58
1.48

Tables:   1

The End!