Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01011110.1 Kokia drynarioides strain JFW-HI SEQ_126083, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3302
ACGTcount: A:0.36, C:0.13, G:0.12, T:0.38

Warning! 50 characters in sequence are not A, C, G, or T


Found at i:2611 original size:15 final size:15

Alignment explanation


    Indices: 2591--2623  Score: 66
    Period size: 15  Copynumber: 2.2  Consensus size: 15

       2581 TAATAATAGC

                           
       2591 ATTTCAATACGAATA
          1 ATTTCAATACGAATA

                           
       2606 ATTTCAATACGAATA
          1 ATTTCAATACGAATA

               
       2621 ATT
          1 ATT

       2624 AAAGATGTTA


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   18  1.00

ACGTcount: A:0.45, C:0.12, G:0.06, T:0.36


Consensus pattern (15 bp):   
ATTTCAATACGAATA
Done.