Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01011113.1 Kokia drynarioides strain JFW-HI SEQ_126086, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 992

Length: 1654
ACGTcount: A:0.34, C:0.18, G:0.20, T:0.28


Found at i:548 original size:19 final size:19

Alignment explanation


    Indices: 524--560  Score: 74
    Period size: 19  Copynumber: 1.9  Consensus size: 19

        514 AATAAACAAG

                               
        524 ATTAATTATTTTTTAATAT
          1 ATTAATTATTTTTTAATAT

                              
        543 ATTAATTATTTTTTAATA
          1 ATTAATTATTTTTTAATA

        561 CATACATACT


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  19   18  1.00

ACGTcount: A:0.38, C:0.00, G:0.00, T:0.62


Consensus pattern (19 bp):   
ATTAATTATTTTTTAATAT
Done.