Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01011127.1 Kokia drynarioides strain JFW-HI SEQ_126100, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 23752
ACGTcount: A:0.27, C:0.16, G:0.20, T:0.36
Warning! 170 characters in sequence are not A, C, G, or T
Found at i:1672 original size:348 final size:347
Alignment explanation
Indices: 949--3693 Score: 3688
Period size: 347 Copynumber: 8.0 Consensus size: 347
939 GGGGCAACAC
* * *
949 CATTCTTTGGGTATATTTACATTCAAATTTGAGGCACGAATGGGATGAAAGGTACCCTTTATGTA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* ** * * *
1014 AATAGATTGCGCAGAACATAATTAGTGCGATCATATCAGCATTAATGCACCAGATCCCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
* * * *
1079 CTCTC-TTGATAA--GTGCTTGGGTGAGAGTTGTACTAGGATGGGT-ATCCTCTTGGAAAGTCCT
131 CTC-CGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGA-CCTCCTGGGAAGTCCT
** *
1140 CGTGTTGCTTCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGTAAT
194 CGTGTTGCACCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAAT
* * * * *
1205 TTTGCGTAACAGTAATGCTTCATGGGATATATGGTCATTCTTAGCGT-TTTTTATTTTTATTTTT
259 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTA-TTTTATTTTT
* * *
1269 ATCCACGAAAATATGTCTTCTCGAG
323 ATCCGCGAAAATACGTCTTCCCGAG
* *
1294 CATTATTTTGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGCTAGT-CTTTATGT
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTA-TCCTTTATGT
* ** *
1358 AAATAGATTGCGCAGAACATAATAAGTGCGATCATACCAGCACTAATGCACTGGATCCCATCAGA
65 AAATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGA
* * * *
1423 ACTCTGTTGATAAGCGTGCTTGGGTGAGAGTAGTACTAGGATGAGTGACCTCCTGGGAAGTCCTT
130 ACTCCGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
* * *
1488 GTGTTGCACCCCTCTTTTTGTTTTTTTCTCTCTTTGTATTATTTTATTTATCGTAAATTTGTAAT
195 GTGTTGCACCCATCTTTTTGTTTTTTT-TCTTTTTGTATTATTTTATTTATCGTAAATTTGCAAT
* * *
1553 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGATAGTATTAGCGTATTTTTATTTTATCTTTA
259 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTA
* * *
1618 TTCGTGAAAATACGTCTTCCCAAG
324 TCCGCGAAAATACGTCTTCCCGAG
* **
1642 CATTATTTGGGTATATTTACATTTAAATTCGAGGCACGAATGAAATGAAAGGTATCCTTTATGTA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* * * * * *
1707 AATAAATTGCGTAAAACAAAATGGGTGTGATCATACCAGCATTAATGCACCAGATCCCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
** * * * * *
1772 CTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACCAGGATGGGTGTCCTCCTGGGAGGTCATCG
131 CTCCGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG
*
1837 TGTTGCACCCATATTTTTGTTTTTTTTTTCTTTTTGTATTATTTTA--TATCGTAAATTTGCAAT
196 TGTTGCACCCATCTTTTTG--TTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAAT
* * * *
1900 TTTGCAAAATAGTAAAGCTTCATAGGATATATGAACATTATTACCGTATTTTTATTTTATTTTTA
259 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTA
*
1965 TCCGCGAAAATAAGTCTTCCCGAG
324 TCCGCGAAAATACGTCTTCCCGAG
*
1989 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTT
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* **
2054 AATAGATTGCGCAAAACACAATGGGAACGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
* ** * * ** *
2119 CTCTG-CAATTAAGAGTGCTTAGGCGAGAGTAGTACTAGGATGGGTCTCCTCCTAGGAAGTCCTC
131 CTCCGTTGA-TAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
**** *
2183 GTGTTGCACCCATCTTTTTG---TTTTNNNNTTTG-A--ATTTT-TTTATCGTAAATTTGTAATT
195 GTGTTGCACCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATT
* * * *
2241 TTGCAAAATAGTAAAGCTTCATGGGATATGTAGACATTATTAGCATATTTTTATTTTATTTTTAT
260 TTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTAT
*
2306 CCGTGAAAATACGTCTTCCCGAG
325 CCGCGAAAATACGTCTTCCCGAG
* * * * *
2329 CATTATTTGGGTATATTTATATTCAAATTCGTGGCATGAATGGGATGACAGGTAGCCTTTATGTA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* * *
2394 AATAGATTGCGCAGAACATAATGGGTGCGATCATACCAACACTAATGCACTGGATCCCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
* ** * *
2459 CTCTG-CAATTAAGCGTGCTTGGGTGAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTC
131 CTCCGTTGA-TAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
*
2523 GTGTTGCACCCATCTTTTTG-------------T-T-TTATTTTATTTATTGTAAATTTAG-AAT
195 GTGTTGCACCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTT-GCAAT
2572 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCG--------TTTT-TTTTTA
259 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTA
*
2628 TCCGCGAAAATACGTCCTCCCGAG
324 TCCGCGAAAATACGTCTTCCCGAG
* * *
2652 CATTATTTGGGTATATTTTCATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGAA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* *
2717 AATAGATTGCGCAAAACATAATGAGTGCGATCATACCAGCACTAATGCACCGGATCTCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
* * *
2782 ATCCGTTGATAAGCGTGCTTGGGTGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG
131 CTCCGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG
*
2847 TGTTGCACCCCTCTTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATT
196 TGTTGCACCCATC-TTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATT
*
2912 TTGCTAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTAT
260 TTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTAT
* * *
2977 CTGCGAAAATACGTATTCTCGAG
325 CCGCGAAAATACGTCTTCCCGAG
* * *
3000 CATTATTTTGGTATATTTGCATTCAAATTCGAGGCACAAATGGGATGAAAGGTATCCTTTATGTA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
*
3065 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCGCTAATG-ACCGGATCCCATCAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
* * * * *
3129 CTCCGTTG-TGGAGCGAGCTTGGGCGAGAGCAGTACTAGGATGGGTGACATCTTGGGAAGTCCTC
131 CTCCGTTGAT-AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
*
3193 GTGTTGCACCCCTCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATT
195 GTGTTGCACCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATT
*
3258 TTGCGAAATAGTAAAGCTTCATGGGATATATGGACAGTATTAGCGTATTTTTATTTTATTTTTAT
260 TTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTAT
* * *
3323 TCGCGAAAATACATCTTCCCAAG
325 CCGCGAAAATACGTCTTCCCGAG
** * *
3346 CATTATTTGAATATATTTACATTCAAATTCAAGGCACGAATAGGATGAAAGGTATCCTTTATGTA
1 CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
* ** * *
3411 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCATTAATGCACTAGATCCTATTAGAA
66 AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
** * * * *
3476 CTCCGCAGTTAAGCATGCTTGGGCGAGAGTAGTACTAGGATGGGTGTCCTCCTGGGAAGTCATCG
131 CTCCGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG
* * * *
3541 TGTTGCACCCATCTTTTTAATTTTTTTTTCTTTATGTATTATTTTTTTTATTGTAAATTTGCAAT
196 TGTTGCACCCATCTTTTT--GTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAAT
* * * *
3606 TTTGCAAAATAGTAAAGATTCATGGGATATATGAACATTATTAGCATATTTTTATTTTATTTTTA
259 TTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTA
3671 TCCGCGAAAATACGTCTTCCCGA
324 TCCGCGAAAATACGTCTTCCCGA
3694 ATGAGATGAA
Statistics
Matches: 2128, Mismatches: 222, Indels: 96
0.87 0.09 0.04
Matches are distributed among these distances:
323 216 0.10
324 11 0.01
330 1 0.00
331 5 0.00
332 58 0.03
333 1 0.00
337 1 0.00
338 2 0.00
339 74 0.03
340 292 0.14
341 1 0.00
342 8 0.00
345 129 0.06
346 235 0.11
347 522 0.25
348 421 0.20
349 144 0.07
350 7 0.00
ACGTcount: A:0.28, C:0.16, G:0.20, T:0.37
Consensus pattern (347 bp):
CATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTATCCTTTATGTA
AATAGATTGCGCAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAA
CTCCGTTGATAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG
TGTTGCACCCATCTTTTTGTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTT
TGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATC
CGCGAAAATACGTCTTCCCGAG
Found at i:5246 original size:17 final size:19
Alignment explanation
Indices: 5226--5262 Score: 60
Period size: 17 Copynumber: 2.1 Consensus size: 19
5216 GTTGCACCCA
5226 TCTTTTTGT-TT-TTTTTT
1 TCTTTTTGTATTATTTTTT
5243 TCTTTTTGTATTATTTTTT
1 TCTTTTTGTATTATTTTTT
5262 T
1 T
5263 TATCATAAAT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
17 9 0.50
18 2 0.11
19 7 0.39
ACGTcount: A:0.05, C:0.05, G:0.05, T:0.84
Consensus pattern (19 bp):
TCTTTTTGTATTATTTTTT
Found at i:6450 original size:348 final size:347
Alignment explanation
Indices: 3872--15169 Score: 13330
Period size: 349 Copynumber: 32.7 Consensus size: 347
3862 CTTTTTTCTC
* *** *
3872 TATTATTTTATTTTTCGTAAATTTGCAATTTTAATAAATAGTAAAGCTTCATGGGATATGTGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
3937 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCAAAAATTCGTCTTTCCGGGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * *
4002 ATATTTACATTCAAATTCGAGGCACGAATGAGATGAAAGGTAACCTTTATGTAAATAGATTGTGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
4067 AAAACATAATGGTTGCGATCGTACTAGCACTAATGCACTGGATCCCATCAGAACTCCGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
4132 GCGTGCTTGGGCGAGAGTAGTAGTAGGATCGGTGACCTCCTGGGAAGTCCTCGTGTTGAACTCAT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
4197 CTTTTTGTTTTTTTTTCTTTTTG
326 CTTTTTG-TTTTTTTTCTTTTTG
* * *
4220 TACTATTTT-TTTATCGTAAATTTGCAATTTGGCGAAATAGTAAAGCTTCATGGGATATATGAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
4284 ATTATAAGCGTATTTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* *
4349 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAGAGGTAGCCTATATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
4414 AGAACATAATGGGTGCGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
4479 GCGTGCTTAGGCAAGAGTTGTACTAGGCTGGGTGACCTCCTGGGAAGTCCTCATGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
4544 CTTTTTG-TTTTTTTC-TTTTG
326 CTTTTTGTTTTTTTTCTTTTTG
* * * * *
4564 TATTATTTTATTTATCGAAAATTTACAATTTTGCGGAATAGTAAAGTTTCATGGGATATGTGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
4629 ATTATTAGCCTGTTTATATTTTATTTTTATCC-CTGAAAATATGTCTTCCCTAGCATTATTTGGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGC-GAAAATACGTCTTCCCGAGCATTATTTGGG
4693 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * * **** *
4758 CAGAACATAATGAGTGCGATCATACCAGCAGTACTGCACCAGTTCCTATCAGAACTCTATTGATA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * *
4823 AGAGTGCTTGGGTGAGAGTTGTATTAGGATGGGTGACTTCCTGGGAAGTCCTCGTGTTGAACCCA
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
** *
4888 TC-TTTT-CATTTTTT-TTTTTA
325 TCTTTTTGTTTTTTTTCTTTTTG
* * *
4908 TATTATTTTATTTATCGTAAATTTCCAATTCTGCGATATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
4973 AGTATTATCGTATTTTTATTTTATTTTTATCCGCAAAAATACATCTTCCCAAGCATTATTTGAGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * **
5038 TTATTTACATTCAAATTCAAGGCACG-A----ATGAAAGGTATTCTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * *
5098 AAAACATAATGGGTGCGATCATACCAGTATTAATGCACCAGATCCAATTAGAACTCCGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* *
5163 GCGTG-TTGGGCGAGAGTAGTACTAGGATGGGT-ATCCTCCTGGGAAGTCATCGTGTTGCACCCA
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGA-CCTCCTGGGAAGTCCTCGTGTTGCACCCC
5226 TCTTTTTGTTTTTTTTTTCTTTTTG
325 TCTTTTTG--TTTTTTTTCTTTTTG
* * * * **
5251 TATTATTTTTTTTATCATAAATTTGCAATTTTGCAAAATAGTAAAGATTCATGGGATATATAAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
5316 ATTATTAGCGTATTTTTATTTTATTTTTATCCACGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * *
5381 ATATTTACATTCAAATTCGAGGCACGAATGCGATGAAAGGTAACCTTTATGCAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * ** * * *
5446 AAAATACAATGGGCACGATCATACCAGCACTAATGCACCGGATCCCATCAAAACTCTGCAATTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * *
5511 GCGTTCTTGGGCGAGAGTAGTACTAGGATGGGAGACCTCTTGGGAAGTCCTCGTGTTGCACCCAT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
5576 C---TT-TTTTTTTTCTTTTTG
326 CTTTTTGTTTTTTTTCTTTTTG
* * * * *
5594 TATTATTTAATATATCGTAAATTTGCAAATTTGTGAAGTAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
5659 ATTATTAGCGAATTTTTATTTTATTTTTTTCCGCAAAAATTCGTCTTCCC-AGGAATTATTTTGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGA-GCATTA-TTTGG
* * *
5723 GTATATTTACATTCAAATTCGAGGCATGAATGGGATGACAGGTAACCTTTATGTAAATAGATTGC
129 GTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC
* * * ** ** *
5788 GCAAAACATAATGGGTGCAATCGTACCAGCACTAATGCAATGTCTCCTATCAGAACTCCGCAGTT
194 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * *
5853 AAG-GATGCTTGGGTGAGAGTAGTAGTAGGATAGGTGACCTCCTGGGAAGTCCTCGTGTTGAACC
259 AAGCG-TGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACC
* ********
5917 CATCTTTTTGTTTTTTTNNNNNNNNNN
323 CCTCTTTTTGTTTTTTT--TCTTTTTG
****************************************
5944 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
6009 ATTATAAGCGTAATTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATATGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * * * *
6074 ATATTTACA-TCCAATTCGAGCCACGAATGGGATGAGAGGTAGCCTATATGTAAATAGAATGTGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
6138 AGAACATAATGGGTGCGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
6203 GCGTGCTTAGACAAGAGTTGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTCATGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
6268 CTTCTTGTTTTTTTTCCTTTTG
326 CTTTTTGTTTTTTTTCTTTTTG
* * *
6290 TATTATTTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTGAAGTTTCATGGGATATATGGA
1 TATTA-TTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * *
6355 CATTATTAGCCTATTTGTATTTTATTTTTATCCCCGAAAATACGTCTTCCCTAGCATTATTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGG
* * *
6420 TATATTTACATTCAAATTCAAGGCACGAATGGGAAGAAAGGTAGCCTTTATTTAAATAGATTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * **** *
6485 CAGAACATAATGAGTGTGATCATACCAGCAGTAATGCACC-AATTCCTATCAGAACTCTATTGAT
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGA-TCCCATCAGAACTCCGCAGTT
* * * * *
6549 AAGCGTGCTTGGGTGAGAGTTGTATTAGGATGGTTGACCTCCTGGGAAGTCCTCGTGTTGAACCC
259 AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* * *
6614 ATCTTTTCGTTTTTTTTTCTTTTTA
324 CTCTTTTTG-TTTTTTTTCTTTTTG
6639 TATTATTTTATTTATCGTAAATTT-CTAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * * * *
6703 CATTATTAGCGTATTTTTATTTTATTTATATCCGTGAAAATACTTGTTCCCAAGCATTTTTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGG
* * * * *
6768 TATATTTACATTCAAATTCGTGGCACGAATGGGATGAAACGCAACCTTTATATAAATAGATTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* ** * *
6833 CAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCTAATCCCATAAGAACTCCGCAGCTA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* **
6898 AGAGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACGACCTGGGAAGTCCTCGTGTTGCACCCC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
6963 TCTTTTTGTTTTTTTTTTCTTTTTG
325 TCTTTTTG--TTTTTTTTCTTTTTG
* *
6988 TGTTATTTTATTTATC-TAAAATTTGCAATTTTACGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGT-AAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* ** *
7052 CATCATTAAAGTATTTTTATTTTATTTTTATCCACGAAAATACGTCTTCCCGAGCATTATTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGG
* * * *
7117 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCTTTTACGTAAATAGGTTGCA
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * ** *
7182 CAGAACATAATGAGTGCGATCATACCAGCACT-ATCGCACTGGATCCCATCAGAACTCTGTTGAT
195 CAGAACATAATGGGTGCGATCATACCAGCACTAAT-GCACCGGATCCCATCAGAACTCCGCAGTT
* *
7246 AAGCGTGCTTGGGTGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
259 AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCA-CC
*
7311 CCCCTTTTTGTTTTTTTTTCTTTTTG
323 CCTCTTTTTG-TTTTTTTTCTTTTTG
7337 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
7402 ATTATTAGCGAATTTTTATTTTATTTTTATCCGCAAAAATTCGTCTTCCC-AGGAATTATTTGGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGA-GCATTATTTGGG
* * * *
7466 TATATTTACATTCAAATTC-ATGGCATGAATGGGATGAAAGGTAACCTTTATGTAAATTGATCGC
130 TATATTTACATTCAAATTCGA-GGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC
* * * *
7530 GCAAAACATAATGGGTGCGATCGTACCAGCACTAATGCACTGGATCCCATCAGAACTTCGCAGTT
194 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * *
7595 AAGCGTGCTTGGGCGAGAGTAGTAGTAGGATAGGTGACCTCCTAGGAAGTCCTCGTGTTGAACCC
259 AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* *
7660 ATCTTTTCGTTTTTTTTTTCTTTTTG
324 CTCTTTT--TGTTTTTTTTCTTTTTG
* * **
7686 TATTATTTTTTTTATCGTAAATTTGCAATTTGGTAAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
7751 ATTATAAGCGTAATTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * * * *
7816 ATATTTACATTCAAATTTGAGGCACGAACGGGATGAGAGGTGGCCTATATGTAAATAGATTGCGT
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
7881 AGAACATAATGGGTGTGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * ** *
7946 GCGTGCTTAGGCCAGAGTTGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTAATGTTTCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
8011 -TTTCTTG-TTTTTCTCTTTTTG
326 CTTT-TTGTTTTTTTTCTTTTTG
* * *
8032 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTAAAGTTTCATTGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
8097 ATTATTAGCCTATTTGTATTTTATTTTTATCCCCGAAAATACGTCTTCACTAGCATTGTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* *
8162 ATATTTACATTCAAATTCGAGGCATGAATGGGATGAAAGGTAGCGTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * ** * *
8227 AGAACATAATGAGTGCGATCATACCAGCAGTACTGCACCAGTTCCTATCAGAACTCTACTGATAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
8292 GCGTGCTTGGGTGAGAGTTGTATTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGAACCCAT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
8357 CTTTTCGTTTTTTTTTCTTTTTA
326 CTTTTTG-TTTTTTTTCTTTTTG
* *
8380 TATTATTTTATTTATCATAAATTT-CTAATTTTGAGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * * * *
8444 CATTATTAGCGTATTTTTATTTTATTTATATCCGTGAAAATACTTGTTCCCGACCATTTTTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGG
* ** * *
8509 TATATTTACATTCAAATTCGAGGCACGAGTGGGATGAAACATAACCTTTATATAAATAGATTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * *
8574 CAGAACAAAATGGGTGCGATTATACCAGCACTAATGCACCGGATTCCATCAGAACTCCGCAGCTA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * ** * *
8639 AGCGTGCTTGGGCTAGAGTAGCACTAGGATGGGTGACGTCCCAGGAAGTCCTTGTGTTGCACCAC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
8704 TCTTTTTGTTTTTTTTTCTTTTTT
325 TCTTTTTG-TTTTTTTTCTTTTTG
*
8728 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
8793 ATCATTAGCGTATTTTTATTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * * * *
8858 ATATTTTCATTCAAATTTCTAGGCACGAATGCGATAAAAGGTAACTTTTATGTAAATAGATTGCG
131 ATATTTACATTCAAA-TTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * ** * * * *
8923 TAAAACACAATTGGCACGATCATATCAGCACTAATGCACCGGATCCCATCAAAACTCTGCAATTA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * *
8988 AGCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCTTGGGAAATCCTCGTGTCGCGCCCC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
***
9053 TCTTTTTGTTTTTTTT-TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
325 TCTTTTTGTTTTTTTTCTTT---------------------------TTG
******************** *
9102 NNNNNNNNNNNNNNNNNNNNATTTTATTTATCGTAAATTTGTAATTTTGCGAAATAGTAAAGCTT
1 TATTATTTTATTTATCGTAAATTT----------------GCAATTTTGCGAAATAGTAAAGCTT
* * * *
9167 CATGGAATATATGGACATTATTAGCGTATTTTTATTTTACTCTTATCCACGAAAATACGTCTTCC
50 CATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCC
* ** *
9232 CGAGCATTATTTGGGTATATTTACATTCAAAATCGAGGCACGAATGGGAT-AGGTGGTAGCCTCT
115 CGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGA-AAGGTAGCCTTT
* * * ** *
9296 ATGTAAATGGATTGCGCAGAACATAATGGGTGCGATTATACCATCACTAATGCACTAGATACCAT
179 ATGTAAATAGATTGCGCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCAT
* * * * *
9361 CAGAAC-CACGCAATTTAGCGTGCTTAGGCGAGAGTAGTACTAGTATGGGTGACCTTCTGGGAAG
244 CAGAACTC-CGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAG
* * * *
9425 TCCTCGTGTTGCAACCATCTTTTT-TTATTTTTCTTTTGG
308 TCCTCGTGTTGCACCCCTCTTTTTGTTTTTTTTCTTTTTG
*
9464 TATTATTTTATTTATCGTAAATTTCCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
9529 ATTACTAGCGTATTTTTATTTTATCTTTATGCGCGAAAATACTTGTTCCCGAGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
** * * * ** * * *
9594 ATATTTACAAACAAATTCAAGACACAAATTTGATGAAACGTAACCTTTATATAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * **
9659 AGAACATAATGGGTACGATCATACCAGCACTAATGCACCAGATCCCATCAGAACTCCGCAACTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * ** *
9724 GGGTGCTTTGGAGAGAGTGGTACTAGGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
9789 CTTTTTGTTTTTTTTCTTTTTG
326 CTTTTTGTTTTTTTTCTTTTTG
** * * * *
9811 TATTATTTTATTTATCAAAAATTTGCAATTTTACGAAATAGAAAAGTTTCGTGGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
9874 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGTGCAATT-TTTTGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGC-ATTATTTGGG
* *
9938 TATATTTACATTCAGATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGGTTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * *
10003 CAGAACATAATGAGTGCGATCATTCCAGCACTAATGCATCGGATCCCATCAGAACTCCGTAGCTA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * ** * * *
10068 AGCGTGCTTGGGAGAGAGTGGTACTAGGATTCGTGACGTCTTGGGAAGTCCACGTGTTGCA-CCC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
10132 -C-------------TCTTTTTG
325 TCTTTTTGTTTTTTTTCTTTTTG
* * * * *
10141 TATTATTTTATTTATCGAAAATTTGCAATTTTGCAAAATAGTAAAACTTCATGGCATATATAGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
10206 ATTATTAGCATATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* *
10271 ATATTTACATTCAAATTCGTGGCACGAATGGGATGAAAGCTAGCCTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * * * ** *
10336 AGAATGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCCGTCAGAACTCTGTTGATAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * * *
10401 GTGTGCTTGGGTGAGAGTTGTACTACGATGGGTGACCTCGTAGGAAGTCCTCGTGTTGCACCCTT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
10466 CTTTTTGTTTTTTTT-TTCCTTTCG
326 CTTTTTGTTTTTTTTCTT--TTT-G
* * *
10490 TATTATTTTATTTATTGTAAATTTACAATTTTGCGAAAGAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
10555 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGAATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* *
10620 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCAC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
10685 AAAACATAATGGGTACGATCATACGAGCACTAATGCACCGGATCCCATAAGAACTCTGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
10750 GCATGCTTGGGCGAGAGTAGTAATAGGATGGGTGCCCTTCTGGGAAGTCCTCATGTTGTACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
10815 CTTTTTGTTTTTTTTTTGTTTTTTG
326 CTTTTTG--TTTTTTTT-CTTTTTG
* * * * *
10840 TTTTATTTTATTTATCGTGAATTTACAATTTTGCGAAATAGTAAAGCTTCTTGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
10905 ATTATTAGCGTATTTTTATTTTATTTTTGTCCACGAAAATACGTCTTCCCGAGCATT-TTTAAGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTT-GGG
*
10969 TATATTTACATTCAAATTCGAGGCACGAATGGAATGAAAGGT-GACCTTTATGTAAATAGATTGC
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAG-CCTTTATGTAAATAGATTGC
* * * * * * *
11033 GCAAAACATAATGGTTGTGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTT
194 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * *
11098 AAGCGTGCTTGAGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGAAATCCTCGTGTTGCACCC
259 AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* *
11163 CTCTGTTTTTTTCTTTTTTTTTTATTG
324 CTCT-TTTTGTT-TTTTTTCTTT-TTG
* *
11190 TATTATTTTATTTATCGTAAATTTGTAATTTTGCGAAATAGTAAAGCTTCATGGAATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
11255 ATTATTAGCGTATTTTTATTTTATTCTTATCCGCTAAAATACGTCTTCCCGAGCATTATTTTGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* ** * * *
11320 ATATTTACATTCAAATTCGAGGCACAAATGGGATGGGAGGTATCCTCTATGTAAATGGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * *
11385 AGAACATAATGGGTGCGATCATACCATCACTAATGCACTGGATCGCATCAGAAC-CACGCAGTTA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTTA
* * * ** * **
11449 AGCGTGCTTAGGCGAGAGTATTACTAGGATGGGTGACGTTTTGGGAAGTCCTCGTGTTGCAGCTA
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
11514 TC-TTTT-TTATTTTTCTTTTTG
325 TCTTTTTGTTTTTTTTCTTTTTG
* **
11535 TATTATTTTATTTATCGTAAATTTCCAATTTTGTTAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
11600 ATTATTAGTGTATTTTTATTTTATTTTTATGCGCGAAAATACTTGTTCCCGATCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
** * * *
11665 ATATTTACAACCAAATTCGAGGCACGAATTGGATGAAACGTAGCCTTTATATAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * *
11730 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACTTGATCCCATCAGAACTCCGCGGCTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** * * *
11795 GGGTGCTTGGGAGAGAGTGGTACTAGGATTCGTGACGTACTGGGAAGTCCTAGTGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
11860 CTTTTTGTTTTTTTTTTCTTTTTG
326 CTTTTTG--TTTTTTTTCTTTTTG
* * *
11884 TATTATTTTATTTATCGAAAAATTCCAATTTTGCGAAATAGTAAAGCTTCATGGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
11947 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCGCGAGCATTATTTTGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * *
12012 ATATTTACATTCAAATTCGAGGCACGAATGGGAT-AGGAGGTAGCCTCTATGTAAATGGATTGCG
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGA-AAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * *
12076 CAGAACATAATTGGTGCGATCATACCATCACTAATGCACTGGATCGCATAAGTAC-CACGCAGTT
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTT
* * * *
12140 AAGCTTGCTTAGGCGAGAGTAGTACTAGGGTGGGTGACCTTCTGGGAAGTCCTCGTGTTGCACCC
259 AAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* *
12205 ATC-TTTT-TTATTTTTCTTTTTG
324 CTCTTTTTGTTTTTTTTCTTTTTG
*
12227 TATTATTTTATTTATCGTAAATTTCCAATTTTGCGAAATAGTAAAGCTTCATGGG----AT----
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * * *
12284 ATTATTAGCGTATTTTTATTTTATCTTTATGCGTGAAAATACTTGTTCCCGAGAATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * * * *
12349 ATATTTACAATCAAATTCGAGGCACGAATTGGATGTAACGTAACCTTTATATAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* *
12414 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAAAACTCCGCAGCTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * ** *
12479 GGGTGCTTAGGAGAGAGTGGTACTAGGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
12544 CTTTTTGTTTTTTTTTTCTTTTTG
326 CTTTTTG--TTTTTTTTCTTTTTG
* * * *
12568 TATTATTTTATTTATCGAAAATTTTCAATTTTACGAAATAGTAAAGCTTCATGGG--ATATGGAA
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
** *
12631 ATTATTAGCG-----------TATTTTTATCCATGAAAATACGTCTTCCCGTGCATT-TTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
*
12684 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGCTAGCCTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * * * * *
12749 AGAATGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCCGTCAGAACTCTGCTGATAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
12814 GTGTGCTTGGGTGAGAGTTGTACTACGATGGGTGACCTCCTAGGAAGTCCTCGTGTTGCACCCTT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
12879 CTTTTTGTTTTTTTTTCTTTTCG
326 CTTTTTG-TTTTTTTTCTTTTTG
* * * * *
12902 TATTATTTTATTTATCGTAAATTTACAATATTGCGAAATAGTAAAGCTTCATCGAATATATGGAT
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
12967 ATTATTAGCGTATTTTTATTTTATTTTTACCCGCGAAGATACGTCTTCCCGAGAATTTTTTAGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * * *
13032 ATATTTACATTCAAATTTGAGGCACGAATGGGATGAAAGGTAACTTTTATATAAATAGACTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * ** * * *
13097 AAAACATAATGGGTGCAATCATACGTGCACTAATGCACCGGATCCAATAAGAACTCTGCAGTTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* **
13162 GCGTGCTAGGGCGAGAGTAGTACTAGGATGGGTCG-CCTTTTGGGAAGTCCTCGTGTTGCACCCC
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGT-GACCTCCTGGGAAGTCCTCGTGTTGCACCCC
13226 TCTTTTTGTTTTTTTTTCTTTTTG
325 TCTTTTTG-TTTTTTTTCTTTTTG
* * *
13250 TATTATCTTATTTATCGTAAATTTACAATTTTGCGAAATAGTAAAGCTTCTTGGGATATAT-GAG
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA-
* * * * * *
13314 CATTATTAGCGTA-TTTAATTTTATTTTTATCCACAAAAATTCGTCTTCCCGAGCATTTTTTAGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGG
* *
13378 TATATTTACATTCAAA-T-----------TGGGATGAAAGGTAACCTTTATATAAATAGATTGCG
130 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * ** * * * *
13431 CAAAACATAATAGGTGTGATCATAGTAGCAGTTATGCATCGGATCCCATTAGAACTCCGCAGTTA
195 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * *
13496 AGCGTGCTTGAGCGAGACTAGTACAAGGATGGGTTACCTCCTGGGAAATCCTCGTGTTGCACCCC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
13561 TCTTTTTGTTTTTTTTTTTCTGATTG
325 TCTTTTTGTTTTTTTTCTT-T--TTG
* * * * * *
13587 TATTATTTTATTGATCGTAAATTTGTAATTTTGTGAAATAATAAAGCTTCATTGAATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
13652 ATTATTAGCGTATTTTTATTTTACTCTTATCTGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* ** * *
13717 ATATTTACATTCAAATTCGAGGCACGAATGGAATGGGAGGTAGCCTCTATGTAAATGGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
13782 AAAACATAATGGGTGCGATTATACCATCACTAATGCACTGGATCCCATCAGAAC-CACGCAGTTA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTTA
* * * *
13846 AGCGTGCTTAGGCGAGAGTAGTACTAGTATGGGTGACCTTCTGGGAAGTCCTCGTGTTGCACCCA
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* *
13911 TC-TTTT-TTATTTTTCTTTTGG
325 TCTTTTTGTTTTTTTTCTTTTTG
13932 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * * *
13997 ATTATTAGCGTATTTTTATTTTATCTTTATGCGCAAAAATACTTGTTCCCGTGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* ** * * * * * * *
14062 ATATTTATAAACATATTCGAGGCACGAATTGGATGAAACGTAACCTTTATATAAATATATTGCGT
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* **
14127 AGAACATAATGGGTGTGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAACTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** *
14192 GGGTGCTTGGGAGAGAGTGGTACTAGGATTAGTGACGTCCTGGGAAGTCCTCGTGTTGCA-CCC-
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
14255 C-------------TCTTTTTG
326 CTTTTTGTTTTTTTTCTTTTTG
* * * *
14264 TATTATTTTATGTATCGAAAATTTGCAATTTTACGAAATAGTAAAGCTTCATAGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
14327 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACATCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
*
14392 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGGTTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
14457 AGAACATAATGAGTGTGATCATTCCAGCACTAATGCACCGGATCCAATCAGAACTCCGCAGCTAA
196 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
*
14522 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGTAGTCCTCGTGTTGCACCCCT
261 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
14587 CTTTTTGTTTTTTTTTTCTTTTTT
326 CTTTTTG--TTTTTTTTCTTTTTG
* * *
14611 TATGATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCTTGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * **
14676 ATTATTAGCATATTTTTATTTTATTTTTGTCCACGAAAATACGTCTTCCCGAGCATTTTTTATGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* *
14741 ATATTTACATTCAAATTCGAGGCACGAACGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * *
14806 AAAACATAA-GAAGTGTGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTA
196 AGAACATAATG-GGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * *
14870 AGCGTGCTTGAGCGAGACTAGTACAAGGGTGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
260 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
14935 AC-----------TTT-TTTTTG
325 TCTTTTTGTTTTTTTTCTTTTTG
* *
14946 TATTATTTTATTTATCGTAAATTTGCAGTTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAT
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
15011 ATTATTAGCGTA-TTTT-TTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGAATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
* * * *
15074 ATATTTACATTAAAATTCGAGGCACGATTGGGATGAGACGTAGCCTTTATGTAAATAGATTGCGC
131 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * *
15139 AGAGC-TAGTGGGTGCGACCATACCAGCACTA
196 AGAACATAATGGGTGCGATCATACCAGCACTA
15170 GGATGGGTGA
Statistics
Matches: 9297, Mismatches: 1439, Indels: 444
0.83 0.13 0.04
Matches are distributed among these distances:
330 289 0.03
331 6 0.00
332 310 0.03
333 106 0.01
334 79 0.01
335 412 0.04
336 49 0.01
337 291 0.03
338 117 0.01
339 92 0.01
341 68 0.01
342 7 0.00
343 335 0.04
344 345 0.04
345 1069 0.11
346 578 0.06
347 841 0.09
348 1448 0.16
349 1744 0.19
350 810 0.09
351 19 0.00
353 2 0.00
362 4 0.00
374 4 0.00
388 9 0.00
389 150 0.02
390 113 0.01
ACGTcount: A:0.27, C:0.16, G:0.20, T:0.36
Consensus pattern (347 bp):
TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
CTTTTTGTTTTTTTTCTTTTTG
Found at i:6996 original size:17 final size:17
Alignment explanation
Indices: 6963--6996 Score: 50
Period size: 17 Copynumber: 2.0 Consensus size: 17
6953 GTTGCACCCC
* *
6963 TCTTTTTGTTTTTTTTT
1 TCTTTTTGTGTTATTTT
6980 TCTTTTTGTGTTATTTT
1 TCTTTTTGTGTTATTTT
6997 ATTTATCTAA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.03, C:0.06, G:0.09, T:0.82
Consensus pattern (17 bp):
TCTTTTTGTGTTATTTT
Found at i:7683 original size:17 final size:19
Alignment explanation
Indices: 7661--7697 Score: 51
Period size: 17 Copynumber: 2.1 Consensus size: 19
7651 GTTGAACCCA
7661 TCTTTTCGT-TT-TTTTTT
1 TCTTTTCGTATTATTTTTT
*
7678 TCTTTTTGTATTATTTTTT
1 TCTTTTCGTATTATTTTTT
7697 T
1 T
7698 TATCGTAAAT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
17 8 0.47
18 2 0.12
19 7 0.41
ACGTcount: A:0.05, C:0.08, G:0.05, T:0.81
Consensus pattern (19 bp):
TCTTTTCGTATTATTTTTT
Found at i:11130 original size:350 final size:348
Alignment explanation
Indices: 3872--23752 Score: 13998
Period size: 348 Copynumber: 56.7 Consensus size: 348
3862 CTTTTTTCTC
* *** *
3872 TATTATTTTATTTTTCGTAAATTTGCAATTTTAATAAATAGTAAAGCTTCATGGGATATGTGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
3937 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCAAAAATTCGTCTTTCCGGGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * *
4002 ATATTTACATTCAAATTCGAGGCACGAATGAGATGAAAGGTAACCTTTATGTAAATAGATTGTGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
4067 AAAACATAATGGTTGCGATCGTACTAGCACTAATGCACTGGATCCCATCAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
4132 GCGTGCTTGGGCGAGAGTAGTAGTAGGATCGGTGACCTCCTGGGAAGTCCTCGTGTTGAACTCAT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
4197 CTTTTTG-TTTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
4220 TACTATTTT-TTTATCGTAAATTTGCAATTTGGCGAAATAGTAAAGCTTCATGGGATATATGAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
4284 ATTATAAGCGTATTTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* *
4349 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAGAGGTAGCCTATATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
4414 AGAACATAATGGGTGCGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * *
4479 GCGTGCTT-AGGCAAGAGTTGTACTAGGCTGGGTGACCTCCTGGGAAGTCCTCATGTTGCACCCC
260 GCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
4543 TCTTTTTG---TTTTTTTC-TTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * * * *
4564 TATTATTTTATTTATCGAAAATTTACAATTTTGCGGAATAGTAAAGTTTCATGGGATATGTGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
4629 ATTATTAGCCTGTTTATATTTTATTTTTATCC-CTGAAAATATGTCTTCCCTAGCATTATTTGGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGC-GAAAATACGTCTTCCCGAGCATT-TTTGGG
4693 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * * **** *
4758 CAGAACATAATGAGTGCGATCATACCAGCAGTACTGCACCAGTTCCTATCAGAACTCTATTGATA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * * *
4823 AGAGTGCTTGGGTGAGAGTTGTATTAGGATGGGTGACTTCCTGGGAAGTCCTCGTGTTGAACCCA
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
** *
4888 TC---TT-TTCATTTTTT-TTTTTA
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
4908 TATTATTTTATTTATCGTAAATTTCCAATTCTGCGATATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
4973 AGTATTATCGTATTTTTATTTTATTTTTATCCGCAAAAATACATCTTCCCAAGCATTATTTGAGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * **
5038 TTATTTACATTCAAATTCAAGGCACG-A----ATGAAAGGTATTCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * *
5098 AAAACATAATGGGTGCGATCATACCAGTATTAATGCACCAGATCCAATTAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * *
5163 GCGTG-TTGGGCGAGAGTAGTACTAGGATGGGT-ATCCTCCTGGGAAGTCATCGTGTTGCACCCA
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGA-CCTCCTGGGAAGTCCTCGTGTTGCACCCC
5226 TCTTTTTGTTTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * * * **
5251 TATTATTTTTTTTATCATAAATTTGCAATTTTGCAAAATAGTAAAGATTCATGGGATATATAAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
5316 ATTATTAGCGTATTTTTATTTTATTTTTATCCACGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * *
5381 ATATTTACATTCAAATTCGAGGCACGAATGCGATGAAAGGTAACCTTTATGCAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * ** * * *
5446 AAAATACAATGGGCACGATCATACCAGCACTAATGCACCGGATCCCATCAAAACTCTGCAATTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
5511 GCGTTCTTGGGCGAGAGTAGTACTAGGATGGGAGACCTCTTGGGAAGTCCTCGTGTTGCACCCAT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
5576 C------TTTTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * * * *
5594 TATTATTTAATATATCGTAAATTTGCAAATTTGTGAAGTAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
5659 ATTATTAGCGAATTTTTATTTTATTTTTTTCCGCAAAAATTCGTCTTCCC-AGGAATTATTTTGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGA-GCA-T-TTTTGG
* * *
5723 GTATATTTACATTCAAATTCGAGGCATGAATGGGATGACAGGTAACCTTTATGTAAATAGATTGC
128 GTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC
* * * ** ** *
5788 GCAAAACATAATGGGTGCAATCGTACCAGCACTAATGCAATGTCTCCTATCAGAACTCCGCAGTT
193 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * * *
5853 AAG-GATGCTTGGGTGAGAGTAGTAGTAGGATAGGTGACCTCCTGGGAAGTCCTCGTGTTGAACC
258 AAGCG-TGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACC
* **********
5917 CATCTTTTTGTTTTTTTNNNNNNNNNN
322 CCTCTTTTTGTTTTTTTTTTCTTTTTG
****************************************
5944 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
6009 ATTATAAGCGTAATTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATATGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * * * *
6074 ATATTTACA-TCCAATTCGAGCCACGAATGGGATGAGAGGTAGCCTATATGTAAATAGAATGTGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
6138 AGAACATAATGGGTGCGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * *
6203 GCGTGCTT-AGACAAGAGTTGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTCATGTTGCACCCC
260 GCGTGCTTGAG-CGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* *
6267 TCTTCTTG--TTTTTTTTCCTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
6290 TATTATTTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTGAAGTTTCATGGGATATATGGA
1 TATTA-TTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * *
6355 CATTATTAGCCTATTTGTATTTTATTTTTATCCCCGAAAATACGTCTTCCCTAGCATTATTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGG
* * *
6420 TATATTTACATTCAAATTCAAGGCACGAATGGGAAGAAAGGTAGCCTTTATTTAAATAGATTGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * **** *
6485 CAGAACATAATGAGTGTGATCATACCAGCAGTAATGCACC-AATTCCTATCAGAACTCTATTGAT
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGA-TCCCATCAGAACTCCGCAGTT
* * * * * *
6549 AAGCGTGCTTGGGTGAGAGTTGTATTAGGATGGTTGACCTCCTGGGAAGTCCTCGTGTTGAACCC
258 AAGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* * *
6614 ATCTTTTCG-TTTTTTTTTCTTTTTA
323 CTCTTTTTGTTTTTTTTTTCTTTTTG
6639 TATTATTTTATTTATCGTAAATTT-CTAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * * *
6703 CATTATTAGCGTATTTTTATTTTATTTATATCCGTGAAAATACTTGTTCCCAAGCATTTTTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGG
* * * * *
6768 TATATTTACATTCAAATTCGTGGCACGAATGGGATGAAACGCAACCTTTATATAAATAGATTGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* ** * *
6833 CAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCTAATCCCATAAGAACTCCGCAGCTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * **
6898 AGAGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACGACCTGGGAAGTCCTCGTGTTGCACCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
6963 TCTTTTTGTTTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* *
6988 TGTTATTTTATTTATC-TAAAATTTGCAATTTTACGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGT-AAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* ** *
7052 CATCATTAAAGTATTTTTATTTTATTTTTATCCACGAAAATACGTCTTCCCGAGCATTATTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGG
* * * *
7117 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCTTTTACGTAAATAGGTTGCA
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * ** *
7182 CAGAACATAATGAGTGCGATCATACCAGCACT-ATCGCACTGGATCCCATCAGAACTCTGTTGAT
194 CAGAACATAATGGGTGCGATCATACCAGCACTAAT-GCACCGGATCCCATCAGAACTCCGCAGTT
* * *
7246 AAGCGTGCTTGGGTGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
258 AAGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCA-CC
*
7311 CCCCTTTTTG-TTTTTTTTTCTTTTTG
322 CCTCTTTTTGTTTTTTTTTTCTTTTTG
7337 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
7402 ATTATTAGCGAATTTTTATTTTATTTTTATCCGCAAAAATTCGTCTTCCC-AGGAATTATTTGGG
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGA-GCATT-TTTGGG
* * * *
7466 TATATTTACATTCAAATTC-ATGGCATGAATGGGATGAAAGGTAACCTTTATGTAAATTGATCGC
129 TATATTTACATTCAAATTCGA-GGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC
* * * *
7530 GCAAAACATAATGGGTGCGATCGTACCAGCACTAATGCACTGGATCCCATCAGAACTTCGCAGTT
193 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * * *
7595 AAGCGTGCTTGGGCGAGAGTAGTAGTAGGATAGGTGACCTCCTAGGAAGTCCTCGTGTTGAACCC
258 AAGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* *
7660 ATCTTTTCGTTTTTTTTTTCTTTTTG
323 CTCTTTTTGTTTTTTTTTTCTTTTTG
* * **
7686 TATTATTTTTTTTATCGTAAATTTGCAATTTGGTAAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
7751 ATTATAAGCGTAATTTTATTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * * * *
7816 ATATTTACATTCAAATTTGAGGCACGAACGGGATGAGAGGTGGCCTATATGTAAATAGATTGCGT
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
7881 AGAACATAATGGGTGTGATCATACCATCACTAATGCACCGGATCGCATCCGAACCCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** *
7946 GCGTGCTT-AGGCCAGAGTTGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTAATGTTTCACCCC
260 GCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
8010 T-TTTCTTG---TTTTTCTCTTTTTG
324 TCTTT-TTGTTTTTTTTTTCTTTTTG
* * *
8032 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTAAAGTTTCATTGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
8097 ATTATTAGCCTATTTGTATTTTATTTTTATCCCCGAAAATACGTCTTCACTAGCATTGTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* *
8162 ATATTTACATTCAAATTCGAGGCATGAATGGGATGAAAGGTAGCGTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * ** * *
8227 AGAACATAATGAGTGCGATCATACCAGCAGTACTGCACCAGTTCCTATCAGAACTCTACTGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
8292 GCGTGCTTGGGTGAGAGTTGTATTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGAACCCAT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
8357 CTTTTCG-TTTTTTTTTCTTTTTA
325 CTTTTTGTTTTTTTTTTCTTTTTG
* *
8380 TATTATTTTATTTATCATAAATTT-CTAATTTTGAGAAATAGTAAAGCTTCATGGGATATATGGA
1 TATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* * * * *
8444 CATTATTAGCGTATTTTTATTTTATTTATATCCGTGAAAATACTTGTTCCCGACCATTTTTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGG
* ** * *
8509 TATATTTACATTCAAATTCGAGGCACGAGTGGGATGAAACATAACCTTTATATAAATAGATTGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * *
8574 CAGAACAAAATGGGTGCGATTATACCAGCACTAATGCACCGGATTCCATCAGAACTCCGCAGCTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * ** * *
8639 AGCGTGCTTGGGCTAGAGTAGCACTAGGATGGGTGACGTCCCAGGAAGTCCTTGTGTTGCACCAC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
8704 TCTTTTTG-TTTTTTTTTCTTTTTT
324 TCTTTTTGTTTTTTTTTTCTTTTTG
*
8728 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
8793 ATCATTAGCGTATTTTTATTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * * * *
8858 ATATTTTCATTCAAATTTCTAGGCACGAATGCGATAAAAGGTAACTTTTATGTAAATAGATTGCG
130 ATATTTACATTCAAA-TTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * ** * * * *
8923 TAAAACACAATTGGCACGATCATATCAGCACTAATGCACCGGATCCCATCAAAACTCTGCAATTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * *
8988 AGCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCTTGGGAAATCCTCGTGTCGCGCCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*****
9053 TCTTTTTGTTTTTTTTTT-TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
324 TCTTTTTGTTTTTTTTTTCT-------------------------TTTTG
******************** *
9102 NNNNNNNNNNNNNNNNNNNNATTT--TATTTAT-CGTAAATTTGTAATTTTGCGAAATAGTAAAG
1 TATTATTTTATTTATCGTAAATTTGCAATTT-TGCG---A---------------AATAGTAAAG
* * * *
9164 CTTCATGGAATATATGGACATTATTAGCGTATTTTTATTTTACTCTTATCCACGAAAATACGTCT
47 CTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCT
* **
9229 TCCCGAGCATTATTTGGGTATATTTACATTCAAAATCGAGGCACGAATGGGAT-AGGTGGTAGCC
112 TCCCGAGCATT-TTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGA-AAGGTAGCC
* * * * ** *
9293 TCTATGTAAATGGATTGCGCAGAACATAATGGGTGCGATTATACCATCACTAATGCACTAGATAC
175 TTTATGTAAATAGATTGCGCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCC
* * * *
9358 CATCAGAAC-CACGCAATTTAGCGTGCTT-AGGCGAGAGTAGTACTAGTATGGGTGACCTTCTGG
240 CATCAGAACTC-CGCAGTTAAGCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGG
* * * *
9421 GAAGTCCTCGTGTTGCAACCATC--TTT-TTTTATTTTTCTTTTGG
303 GAAGTCCTCGTGTTGCACCCCTCTTTTTGTTTTTTTTTTCTTTTTG
*
9464 TATTATTTTATTTATCGTAAATTTCCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
9529 ATTACTAGCGTATTTTTATTTTATCTTTATGCGCGAAAATACTTGTTCCCGAGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
** * * * ** * * *
9594 ATATTTACAAACAAATTCAAGACACAAATTTGATGAAACGTAACCTTTATATAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * **
9659 AGAACATAATGGGTACGATCATACCAGCACTAATGCACCAGATCCCATCAGAACTCCGCAACTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** *
9724 GGGTGCTTTG-GAGAGAGTGGTACTAGGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGCACCCC
260 GCGTGC-TTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
9788 TCTTTTTG--TTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
** * * * *
9811 TATTATTTTATTTATCAAAAATTTGCAATTTTACGAAATAGAAAAGTTTCGTGGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
9874 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGTGCAATTTTTTGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGC-ATTTTTGGGT
* *
9939 ATATTTACATTCAGATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGGTTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
10004 AGAACATAATGAGTGCGATCATTCCAGCACTAATGCATCGGATCCCATCAGAACTCCGTAGCTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** * * *
10069 GCGTGCTTGGGAGAGAGTGGTACTAGGATTCGTGACGTCTTGGGAAGTCCACGTGTTGCA-CCC-
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
10132 C---------------TCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * * * *
10141 TATTATTTTATTTATCGAAAATTTGCAATTTTGCAAAATAGTAAAACTTCATGGCATATATAGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
10206 ATTATTAGCATATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* *
10271 ATATTTACATTCAAATTCGTGGCACGAATGGGATGAAAGCTAGCCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * * * ** *
10336 AGAATGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCCGTCAGAACTCTGTTGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * * * *
10401 GTGTGCTTGGGTGAGAGTTGTACTACGATGGGTGACCTCGTAGGAAGTCCTCGTGTTGCACCCTT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
10466 CTTTTTGTTTTTTTTTTCCTTTCG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
10490 TATTATTTTATTTATTGTAAATTTACAATTTTGCGAAAGAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
10555 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGAATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* *
10620 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCAC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
10685 AAAACATAATGGGTACGATCATACGAGCACTAATGCACCGGATCCCATAAGAACTCTGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * * *
10750 GCATGCTTGGGCGAGAGTAGTAATAGGATGGGTGCCCTTCTGGGAAGTCCTCATGTTGTACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
10815 CTTTTTGTTTTTTTTTTGTTTTTTG
325 CTTTTTGTTTTTTTTTT-CTTTTTG
* * * * *
10840 TTTTATTTTATTTATCGTGAATTTACAATTTTGCGAAATAGTAAAGCTTCTTGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
10905 ATTATTAGCGTATTTTTATTTTATTTTTGTCCACGAAAATACGTCTTCCCGAGCATTTTTAAGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTT-GGGT
*
10970 ATATTTACATTCAAATTCGAGGCACGAATGGAATGAAAGGT-GACCTTTATGTAAATAGATTGCG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAG-CCTTTATGTAAATAGATTGCG
* * * * * * *
11034 CAAAACATAATGGTTGTGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * *
11099 AGCGTGCTTGAGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGAAATCCTCGTGTTGCACCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
11164 TCTGTTTT-TTTCTTTTTTT-TTTATTG
324 TCT-TTTTGTTT-TTTTTTTCTTT-TTG
* *
11190 TATTATTTTATTTATCGTAAATTTGTAATTTTGCGAAATAGTAAAGCTTCATGGAATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
11255 ATTATTAGCGTATTTTTATTTTATTCTTATCCGCTAAAATACGTCTTCCCGAGCATTATTTTGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* ** * * *
11320 ATATTTACATTCAAATTCGAGGCACAAATGGGATGGGAGGTATCCTCTATGTAAATGGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * *
11385 AGAACATAATGGGTGCGATCATACCATCACTAATGCACTGGATCGCATCAGAAC-CACGCAGTTA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTTA
* * ** *
11449 AGCGTGCTT-AGGCGAGAGTATTACTAGGATGGGTGACGTTTTGGGAAGTCCTCGTGTTGCA--G
259 AGCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* * *
11511 CT-ATCTT-TTTTATTTTTCTTTTTG
323 CTCTTTTTGTTTTTTTTTTCTTTTTG
* **
11535 TATTATTTTATTTATCGTAAATTTCCAATTTTGTTAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
11600 ATTATTAGTGTATTTTTATTTTATTTTTATGCGCGAAAATACTTGTTCCCGATCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
** * * *
11665 ATATTTACAACCAAATTCGAGGCACGAATTGGATGAAACGTAGCCTTTATATAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * *
11730 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACTTGATCCCATCAGAACTCCGCGGCTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * ** * * *
11795 GGGTGCTTGGGAGAGAGTGGTACTAGGATTCGTGACGTACTGGGAAGTCCTAGTGTTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
11860 CTTTTTGTTTTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
11884 TATTATTTTATTTATCGAAAAATTCCAATTTTGCGAAATAGTAAAGCTTCATGGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
11947 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCGCGAGCATTATTTTGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * *
12012 ATATTTACATTCAAATTCGAGGCACGAATGGGAT-AGGAGGTAGCCTCTATGTAAATGGATTGCG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGA-AAGGTAGCCTTTATGTAAATAGATTGCG
* * * * * *
12076 CAGAACATAATTGGTGCGATCATACCATCACTAATGCACTGGATCGCATAAGTAC-CACGCAGTT
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTT
* * *
12140 AAGCTTGCTT-AGGCGAGAGTAGTACTAGGGTGGGTGACCTTCTGGGAAGTCCTCGTGTTGCACC
258 AAGCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACC
* *
12204 CATC---TT-TTTTATTTTTCTTTTTG
322 CCTCTTTTTGTTTTTTTTTTCTTTTTG
*
12227 TATTATTTTATTTATCGTAAATTTCCAATTTTGCGAAATAGTAAAGCTTCATGGG----AT----
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
12284 ATTATTAGCGTATTTTTATTTTATCTTTATGCGTGAAAATACTTGTTCCCGAGAATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * * * * *
12349 ATATTTACAATCAAATTCGAGGCACGAATTGGATGTAACGTAACCTTTATATAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* *
12414 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAAAACTCCGCAGCTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * ** *
12479 GGGTGCTT-AGGAGAGAGTGGTACTAGGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGCACCCC
260 GCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
12543 TCTTTTTGTTTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * * *
12568 TATTATTTTATTTATCGAAAATTTTCAATTTTACGAAATAGTAAAGCTTCATGGG--ATATGGAA
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
** *
12631 ATTATTAGCG-----------TATTTTTATCCATGAAAATACGTCTTCCCGTGCATTTTTGGGTA
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTGGGTA
*
12685 TATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGCTAGCCTTTATGTAAATAGATTGCGCA
131 TATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGCA
** * * * * *
12750 GAATGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCCGTCAGAACTCTGCTGATAAG
196 GAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAAG
* * * * * * *
12815 TGTGCTTGGGTGAGAGTTGTACTACGATGGGTGACCTCCTAGGAAGTCCTCGTGTTGCACCCTTC
261 CGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCTC
*
12880 TTTTTG-TTTTTTTTTCTTTTCG
326 TTTTTGTTTTTTTTTTCTTTTTG
* * * * *
12902 TATTATTTTATTTATCGTAAATTTACAATATTGCGAAATAGTAAAGCTTCATCGAATATATGGAT
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
12967 ATTATTAGCGTATTTTTATTTTATTTTTACCCGCGAAGATACGTCTTCCCGAGAATTTTTTAGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * * * *
13032 ATATTTACATTCAAATTTGAGGCACGAATGGGATGAAAGGTAACTTTTATATAAATAGACTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * ** * * *
13097 AAAACATAATGGGTGCAATCATACGTGCACTAATGCACCGGATCCAATAAGAACTCTGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * **
13162 GCGTGCTAGGGCGAGAGTAGTACTAGGATGGGTCG-CCTTTTGGGAAGTCCTCGTGTTGCACCCC
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGT-GACCTCCTGGGAAGTCCTCGTGTTGCACCCC
13226 TCTTTTTG-TTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
13250 TATTATCTTATTTATCGTAAATTTACAATTTTGCGAAATAGTAAAGCTTCTTGGGATATAT-GAG
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA-
* * * * *
13314 CATTATTAGCGTA-TTTAATTTTATTTTTATCCACAAAAATTCGTCTTCCCGAGCATTTTTTAGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGG
* *
13378 TATATTTACATTCAAA-T-----------TGGGATGAAAGGTAACCTTTATATAAATAGATTGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * ** * * * *
13431 CAAAACATAATAGGTGTGATCATAGTAGCAGTTATGCATCGGATCCCATTAGAACTCCGCAGTTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * *
13496 AGCGTGCTTGAGCGAGACTAGTACAAGGATGGGTTACCTCCTGGGAAATCCTCGTGTTGCACCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
**
13561 TCTTTTTGTTTTTTTTTTTCTGATTG
324 TCTTTTTG-TTTTTTTTTTCTTTTTG
* * * * * *
13587 TATTATTTTATTGATCGTAAATTTGTAATTTTGTGAAATAATAAAGCTTCATTGAATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
13652 ATTATTAGCGTATTTTTATTTTACTCTTATCTGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* ** * *
13717 ATATTTACATTCAAATTCGAGGCACGAATGGAATGGGAGGTAGCCTCTATGTAAATGGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * *
13782 AAAACATAATGGGTGCGATTATACCATCACTAATGCACTGGATCCCATCAGAAC-CACGCAGTTA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGTTA
* *
13846 AGCGTGCTT-AGGCGAGAGTAGTACTAGTATGGGTGACCTTCTGGGAAGTCCTCGTGTTGCACCC
259 AGCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* * *
13910 ATC---TT-TTTTATTTTTCTTTTGG
323 CTCTTTTTGTTTTTTTTTTCTTTTTG
13932 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * * *
13997 ATTATTAGCGTATTTTTATTTTATCTTTATGCGCAAAAATACTTGTTCCCGTGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* ** * * * * * * *
14062 ATATTTATAAACATATTCGAGGCACGAATTGGATGAAACGTAACCTTTATATAAATATATTGCGT
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* **
14127 AGAACATAATGGGTGTGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAACTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * ** *
14192 GGGTGCTTGGGAGAGAGTGGTACTAGGATTAGTGACGTCCTGGGAAGTCCTCGTGTTGCA-CCC-
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
14255 C---------------TCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * * *
14264 TATTATTTTATGTATCGAAAATTTGCAATTTTACGAAATAGTAAAGCTTCATAGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
14327 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACATCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
*
14392 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGGTTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
14457 AGAACATAATGAGTGTGATCATTCCAGCACTAATGCACCGGATCCAATCAGAACTCCGCAGCTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* *
14522 GCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGTAGTCCTCGTGTTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
14587 CTTTTTGTTTTTTTTTTCTTTTTT
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
14611 TATGATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCTTGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * **
14676 ATTATTAGCATATTTTTATTTTATTTTTGTCCACGAAAATACGTCTTCCCGAGCATTTTTTATGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* *
14741 ATATTTACATTCAAATTCGAGGCACGAACGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * *
14806 AAAACATAA-GAAGTGTGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTA
195 AGAACATAATG-GGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * *
14870 AGCGTGCTTGAGCGAGACTAGTACAAGGGTGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
14935 AC-------------TTT-TTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* *
14946 TATTATTTTATTTATCGTAAATTTGCAGTTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAT
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
15011 ATTATTAGCGTA-TTTT-TTTTATTTTTATCCTCGAAAATACGTCTTCCCGAGAATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * *
15074 ATATTTACATTAAAATTCGAGGCACGATTGGGATGAGACGTAGCCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * * ** *
15139 AGAGC-TAGTGGGTGCGACCATACCAGCACTAGGATGGGTGACC--TTCTCGTGTTGCAC-CCAT
195 AGAACATAATGGGTGCGATCATACCAGCACTA--AT--G-CACCGGATCCCAT-CAGAACTCC--
**** ** * ** * * ** * * *** ** ** * * **
15200 TTTTTTTAA-TTTTCTTTTTG-TATTA-TTTTATTTATCGA-AAATTTCCAATTTTGCGAAATAG
252 -GCAGTTAAGCGTGC-TTGAGCGA-GAGTAGTA-CTA-GGATGGGTGACC--TCCTGGGAAGTCC
*** **** * * * *** * ** *
15261 TAAAGCTT-CATGGGAT-ATATGGACATTATTAGCGAATTTT-
310 TCGTG-TTGCA-CCCCTCTTTTTGTTTTTTTTTTC--TTTTTG
* * *
15301 TATT-TTATT-TTTATGCGCGATAATACTTGTTCACGAGCATTTTTTGCCTATATTTATAATCAA
1 TATTATT-TTATTTAT---CG-TAA-A--T-TT-----GCA-ATTTTG-CGA-A---ATAGT-AA
* * * * * * * * * * * *
15364 A-TTTGA-GGCACAAATTGG--ATGA--AACGTAACCTTTATATATATAGATTGTA-CAGAAC-A
45 AGCTTCATGGGATATA-TGGACATTATTAGCGT-A--TTTTTAT-TTTA-TTTTTATCCG--CGA
* * * * ** ***** ** * * *
15421 TAATGGATGCGATCATACC-AGCACTAATGCACCGGA-TCCCA-TCAGAACTC--CGCAACTAA-
102 -AA---ATACG-TCTTCCCGAGCATTTTTG-GGTATATTTACATTCA-AATTCGAGGC-ACGAAT
* *** * **** * * * * ** * * * ***
15480 GCG-TGCTTGGGAG-AGAGAGGT-ACTAGGATT-CG-TG-ACGTCTTGGGAAGTC-CTCGT-GTT
159 GGGATGAAAGGTAGCCTTTATGTAAATA-GATTGCGCAGAACATAATGGG-TG-CGATCATACCA
*** **** **** ****** ** * ** ** * * **
15537 GCACCCCT-CTTTTTG-TTTTTTTTTCTTTTTGTA-TT-A-TTTTATTTATCGA-AGATTTTCAA
221 GCACTAATGC-ACCGGATCCCATCAGAACTCCGCAGTTAAGCGTGCTTGAGCGAGAG-TAGT--A
* * * * * * * * * * * * *
15596 TCTTGCGAAAT-AGTAAAGCTTCATGGGATATGGACAT--TATT--A-GCGTATTTTTATTTTAT
282 -CTAG-G--ATGGGT-GA-CCTCCTGGGA-A--GTCCTCGTGTTGCACCCCTCTTTTTGTTTTTT
* ****
15655 TTTTATCCGCG
338 TTTTCTTTTTG
* * ** ** * *
15666 -A-AAATACATCTTCCCG-AGCATTATTTGGGTCTA-TTTGC---AT--TCAAA--TTCGA-GGC
1 TATTATTTTAT-TTATCGTA--A--ATTT--G-CAATTTTGCGAAATAGT-AAAGCTTC-ATGGG
* * *** ** * * ** ** *
15719 ACGA-ATGG-GA-TGGGAG-GTAGCCTCTA-TGTAAATGGATTGCGCAGATCATAATGGATGCGA
56 A-TATATGGACATTATTAGCGTA-TTTTTATTTTATTTTTA-TCCGC-GA--A-AAT--A--CG-
* * * * ** ** ** ** * * * **
15779 TCATACC-ATCACTAATGCACTGGA-TCGCA-TCAGAA--CCACGCA-GTTAA-GCG-TGCTTAG
109 TCTTCCCGAGCATTTTTG-GGTATATTTACATTCA-AATTCGAGGCACG--AATGGGATG-AAAG
* ** * * ** ** * **
15836 GCGAG--AGTA-GT-ACTAGGA-TG-G--GTAACTTTCTGGG-AAG-TCCT--C-G---TGTTGC
169 G-TAGCCTTTATGTAAATA-GATTGCGCAG-AACATAATGGGTGCGATCATACCAGCACTAATGC
* *** * **** **** * ** ** * * * * * * * **
15885 ACC-CATCTTTTTTATTTTTCTTTTTGTATTA-TTTTATTTATC-ATA-AATTTCCA--ATTTTG
231 ACCGGATC-CCATCAGAACTC-CGCAGT-TAAGCGTGCTTGAGCGAGAGTAGTACTAGGA-TGGG
* ** * ** * * * * ** * ** * *
15944 CGAAAT--AGTAAAGCTTCATGGGATATATGGA-CATTATTAGTGTATTTTTATTTT-ATCTT-
292 TGACCTCCTGGGAAG--TCCT-CG-TGT-TGCACCCCTCTTTTTGT-TTTTT-TTTTCTTTTTG
*** ** ** * ****** * ** * *
16003 TATGCGTGAAAATACCTGTTCCCGAGCATTTTTTG-GGTATATTTACAATCAAATTCGA-GGCAC
1 TATTATTTTATTTATC-GTAAATTTGCA-ATTTTGCGAAATA-GTA-AAGC---TTC-ATGG---
* * ** * ** ** * *
16066 GA-AT-TGG--ATGA--AACGTAACCTTTA-TATAAATAGATTGCGCAGAACAAAATGGGTGCGA
55 GATATATGGACATTATTAGCGT-ATTTTTATTTTATTTTTA-TCCGC-G---AAAA----TACG-
* * * ** **** ** * * * * *** *
16124 TCATACC-AGCACTAATGCACCTGA-TCCCA-TCAGAACTC--CGCAGCTAA--GGTTGCTTGGG
109 TCTTCCCGAGCATTTTTGGGTAT-ATTTACATTCA-AATTCGAGGCA-CGAATGGGATGAAAGGT
**** * * * * ** * ** * * *
16182 AGAGAGT-CGT-ACTAGGATT-CG-TG-ACGTCCTGGGAAGTCCTCG-TGTTGCACC-CCTCTTT
171 AGCCTTTATGTAAATA-GATTGCGCAGAACATAAT-GG--GT--GCGATCAT--ACCAGCAC-TA
* ******* * ** ** * * **** * *** * * *
16240 CTGTTTTTTTTTCTTTTTGTATTATTTTATTTATCAAAAATTTACAATTTTA-CGA-AATAGTAA
227 ATGCACCGGATCCCATCAGAACT-CCGCA-GT-T---AAGCGTGC---TTGAGCGAGAGTAGT--
** * * ** * ** ***** ** * ***
16303 AGCT-TCAT-GG-GA--T-AT-GGACATTATTAGCGTATTTTTATCCGCGAAAATACGTATTCCC
281 A-CTAGGATGGGTGACCTCCTGGGA-AGTCCT--CGT-GTTGCA-CC-CCTCTTTTTGTTTTTTT
* *
16361 GTGCATTTTTGGG
339 TTTC-TTTTT--G
* * * ** * * ** * * * *
16374 TATAATTGCATTCAAATTCGAGGCACAAATGGGATGAAAGGTAGC-CATTATGTAAATAGGTTGC
1 TATTATT---TT---ATT-TA-TCGTAAAT---TTGCAATTTTGCGAAATA-GT-AA-AGCTT-C
*** * * * * **** *** **** **
16438 GCAGAACATAATGAGTGCGATCATTCCAGCAGTAATGCACCGGATCCCATCAGAACTCCGCAGCT
51 ATGGGATAT-ATG-G-AC-ATTATT--AGC-GT-AT---TTTTATTTTATTTTTA-TCCGC-GAA
* ** ** * ** * * * ** *
16503 AA-GCGTGCTTGGGCGAG-AGTAGTACTAGG-ATGGGTGACCTCCTGGGTAGTTCTCGTGTTGCA
103 AATACGT-CTT-CCCGAGCA-T--TTTTGGGTAT-ATTTACAT--T---CAAAT-TCGAG--GCA
*** ****** ** * * * ** * * ** **
16565 CCCCT----TTTTTTTTTTCATTTTTGTATTATTTTATTTATCG-AAAATTTGCAAT-TTTGCNN
154 CGAATGGGATGAAAGGTAGCCTTTATGTA--AATAGA-TT-GCGCAGAACAT--AATGGGTGC--
****************************************************************
16624 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
211 GATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAAGCGTGCTTGAGCGAGA
* * * ** * * ** * * *** *
16689 -TA-T-TTA-CAT---TCAAATTC-GAGGCACG-AAT-GGGATG-AAAGCTAGCCTTTATGTAAA
276 GTAGTACTAGGATGGGTGACCTCCTG-GG-AAGTCCTCGTGTTGCACCCCT---CTTTTTGT---
*** *** ****
16743 TAGATTGCGCAGAATG
333 TTTTTTTTTCTTTTTG
* *** * * *** * *
16759 TAATGAGTGCGATTATACCAGCACTAA--TGCACCGGATCCCGTCAGAACTCTGCTGATAAG-TG
1 T-ATTA-TTTTATT-TATC-GTA--AATTTGCA----ATTTTG-C-GAAAT-AG-T-A-AAGCT-
* * * * ** * **
16821 TGCTTGGG-TGAGAGTTGTACTACGATGGGTGACCTCCTAG-GAAGTCCTCGTGTTGCACCCTTC
49 T-CATGGGAT-ATA--TG---GAC-AT---T-A--T--TAGCGTA-T--TTTTATTTTA---TT-
* ***** *** *** ** ** * *
16884 TTT-T-TG-TTTTTTTTTTCTTTTGGTATTATTTTATTTATCGTAAATTTACAATTTTACGAAAT
91 TTTATCCGCGAAAATACGTCTTCCCG-AGCA--TT-TTT-GGGTATATTTAC-A--TT-CAAA-T
** * * * * ** ** *** *
16946 AGTAAAGCTTCACGGGATATATGGACATTATTAGCGTA-TTTTTAT-TTTATTTTTATCCGC-GA
146 --TCGAG--GCAC--G--A-ATGG-GATGA-AAG-GTAGCCTTTATGTAAATAGAT-TGCGCAGA
* * ** * * **** * * * * ** * * * *
17008 AGAT-ACGTCTTCCCGATAATTTTTTGGGTA-TATTTACATTCAAATTCGAGGCACGAA-TGGGA
198 ACATAATG-GGT-GCGATCA---TACCAGCACTA-ATGCA-CCGGATCCCA-TCA-GAACT---C
* * * * * ** * * * * ** * * **
17070 TGAAAGGTAACCTTTATGTAAATCGATTGCGCAAAACATA--ATGGGTG-CGATCATACG-AG--
251 CG-CAGTTAAGCGTGCT-T-GAGCGA--GAGTAGTAC-TAGGATGGGTGAC-CTCCTGGGAAGTC
* ** ** ** ** *** **** **
17129 CAC-TAATGCACCGGATCCCATAAGAACTCTGCAGTCAAGCGTGCTTG
309 CTCGTGTTGCACC-CCT-CTTTTTG---T-T-TTTTTTTTC-TTTTTG
**** *** * * * * * * ** *** ***
17176 GGCGAGAGTA-GTA-C-TAGGATGGGTG-ACCTTTTGGGAAGTCCTCGTG-TTGCACCCCT-CTT
1 TATTATTTTATTTATCGTA-AAT--TTGCA-ATTTTGCGAAATAGTAAAGCTT-CA----TGGGA
* * *** * ** * * ** *
17235 TTTCTTTTTC-TTTTTTCCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGTGAAATA
57 TAT-ATGGACATTATTAGCGTATT-T-TTATTTTATTT-T--T--ATCCGC------G-AAAATA
** * * * * * *** *
17299 -GTAAAGCTTCTTG-GGATATTTGGGCAT-TATTAGCGTATTTTTATTTTATTTTTGTCCACGAA
107 CGT----CTTCCCGAGCATTTTTGGGTATAT-TTA-C--A--TTCA---AATTCGAG-GCACG--
*** *** * * * * * * ***
17361 AATACGTCTTCCCGAGCATTTTTTAG-GTATATTTACATTCAAATTCGAGGCACGAATGGAATGA
156 AAT--GGGAT---GA--A--AGGTAGCCTTTATGTA-AAT-AGATT-G-CGCA-GAACATAATG-
** * ** * * * *** * * *
17425 AAGGTGACCTTTATGTAAATAG-A-TTATGCAAAACATAATGGTTGTGATCA-TACT-AGCA-AT
206 --GGTG-CGATCA--T-ACCAGCACTAATGC---AC----CGGATCCCATCAGAACTCCGCAGTT
* * * * ** ****
17485 AATGCATCGGATCCCATTAGAACTCCGCA-ATTAAGCGTGCTTGAGCGA-GATTAGTACAAGGAT
258 AA-G---C-G-T-GC-TT-G-A--GCG-AGAGT-A--GTAC-T-AG-GATGGGT-G-AC-CTCCT
* * * ** * * ** * *
17548 GGG-TGACCTCCTG--GCAAATCCTCGTGTTGCACCCCTCTTTTTGTTTTTTTTTTATTG
301 GGGAAGTCCTCGTGTTGC-ACCCCTCTTTTTG----TTTTTTTT------TTCTTT-TTG
* * *
17605 TATTATTTTATTTATCGTAAATTTGTAATTTTGCGGAATAGTAAAGCTTCATGGAATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
17670 ATTATTTTAGCGTATTTTTATTTTATTTTTATCCGCGAAAGTATGTCTTCCCGAGCATTATTTGG
66 ATTA--TTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGG
* * ** ** * * *
17735 GTATATTTACATTTAAATTCAAGGCACGAATGATATGGGAGGTAGCCTCTATATAAATGGATTGC
128 GTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC
* * * *
17800 GTAGAACATAATGGGTGCGATCATACCATCACTAATGCACTGGATCGCATCAGAA-TCACGCAGT
193 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTC-CGCAGT
**
17864 TAAGCGTGCTT-AG-GTAAGAGTAGTACTAGGATGGGTGACCTTTTGGGAAGTCCTCGTGTTGCA
257 TAAGCGTGCTTGAGCG--AGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCA
* * *
17927 CCCATC---TT-TTTTATTTTTATTTTTG
320 CCCCTCTTTTTGTTTTTTTTTTCTTTTTG
* *
17952 TATTATTTTATTTATCGAAAATTTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
** * * **
18017 ATTATTAGCGTATTTTTATTTTATTTTTATGTGCGAAAATACTTGTTCCCGAGCAGTTTTTGCCT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * * * * *
18082 ATATTTACAATCAAATTCGAGGCAC-ACATTGGATGAAACGTAACCTTTATATAAATAGATTGTG
130 ATATTTACATTCAAATTCGAGGCACGA-ATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
*
18146 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGCTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * ** * * *
18211 CGGGTGCTTGGGAGAGAGTGGTACTATGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGTACTCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
18276 TCTTTTTGTTTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* *
18301 TATTATTTTATTTTTCGAAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGG--ATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
18364 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGTGCATTTTTGGGTA
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTGGGTA
* * * * *
18429 TATTTACATTTAAATTCGAAGCACAAATGGAATGAAAGGTAACCTTTATGTAAATAGATT-CTGC
131 TATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGC-GC
* ** * * * *
18493 AAAACATAATGGGTGTAATCATACTAGCACTAATGCACCGGATCCCATCAAAACTCTGCAATTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
18558 GCGTGCATGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTTGGAAGTCCTTGTGCTGCA---CT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
18620 CTTTTTG-TTTTTTTTTC-TTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
18642 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAATAAAGCTTCTTGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * * *
18707 ATTAATAGCATATTTTTCTTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGTT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* *
18772 ATATTTACATTCAAATTTGAGGCACGAATAGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * ** *
18837 AAAACGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCCTTCAGAACTCTGTTGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
18902 GGGTGCTTGGGTGAGAGTTGTACT---A---GT-A-----TGAGAAGTCCTCATGTTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
18955 CTTTTTGTTTTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * * *
18979 AATTATTTTATTTATCGTGAATTT-CTAATTTTGCGAAATACTAAAGGTTCATGGGATATATGGA
1 TATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGA
* *
19043 CAATATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATAAGTCTTCCCGAGCATTATTTGGG
65 CATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGG
* *
19108 TATATTTGCATTCAAATTCGAGGCACGAATGGGATGAAAGCTAGCC-TTATGTAAATAGA-TGCG
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCG
* * * * *
19171 CAGAACATAATGAGCGCAATCATTCCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGCTA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * *
19236 AGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTTACCTCGTGGGAAGTCCTCGTGTTGCACCCT
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* * *
19301 TCTTCTT-TCTTTTTTTTCTTTTGG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
19325 TGTTATTTTATTTATCGTAAATTTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAT
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
19390 ATTATTAGCGTATTTTTATTTTATTTTTACCCGCGAAGATACGTCTTCTCGAGAATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* *
19455 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTGTGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * * * * *
19520 AAAACATAATGAGTGCGATCATACTAGCAGTAATTCATCAGATCCCATTAGAACTCCACAGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * * * *
19585 TCGTGCTTGGGCGAGACTTGTACAAGGATGGGTAACCTCCTGGGAAGTCATCGTGCTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
19650 CTTTTTGTTTTTTTTTTTCTTTTTG
325 CTTTTTG-TTTTTTTTTTCTTTTTG
* * * *
19675 TATTATTTTATTTATTGTAAATTTGTAATTTTGTGAAATAGTAAAGCTTCATGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
** *
19740 ATTATTAGCGTATTTTTATTTTATTTTTATCTACGAAAATACGTCTTCCCGTGCACTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* *
19805 ATATTTACATTCAAATTCGAGGCACGAATGGGTTGAAAGGTAGCCTTTATGTAAATAGACTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * *
19870 A-AACCATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCACATTAGAACTCAGCAATTA
195 AGAA-CATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * *
19934 TGCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCT
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
19999 TCTTTTTG-CTTTTTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
20023 TATTATTTTATTTATTGTAAATTTGCAATTTTGCGAAATAATAAAGCTTCATGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
20088 ATTATTAGCATATTTTTATTTTATTGTTATCCACGAAAATACGTCTTCCCAAGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * * * *
20153 ATATTTACATTCAAATTCGAGGCACAAATGGGTTGAAAGGTATCCATTATGTAAATAGATTGCGG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
20218 AAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * *
20283 GCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGGAGTCCT-GATGTTGCACCCC
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG-TGTTGCACCCC
**
20347 TCTTTTTGTTTTTTTTTTTCTGATTG
324 TCTTTTTG-TTTTTTTTTTCTTTTTG
* *
20373 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTCCAT-GGA-GTATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* *
20436 ATTATTAGCGTATTTTTATTTTATTTTTATCCGTGAAAATACGTCTTCTCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * * *
20501 ATATTTACAATCAAATTCGAGGGACGAATGGGATGAAAGGTAGCCTTTATGGAAACAGATTGTGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * ** *
20566 AGAACATAATGAGTGCGATCATACCAGCACAAATGCACCGGATCCCATCAGAACTCTGTTGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * * * *
20631 GCGTGC-TAAGGTGAGAGTTGTACTAGTATGGGTGACCTCCTAGGAAGTCCTTGTGTTGTACCAC
260 GCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
20695 TCTGTTTGTTTTTTTTCTTCTTTTTG
324 TCTTTTTGTTTTTTTT-TTCTTTTTG
* * *
20721 CATTATTTTATTTATCGTGAATTTGTAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
*
20786 ATTATTAGCGTATATTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
*
20851 ATATTTACATTCAACTTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * ** *
20916 AAAACATAATGAGTGCGATCATTCCAGCACTAATGCACCGGATCCCATTAGAACTCTGTTGATAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * *
20981 GCGTGCTTGGGTGAGAGT-TTACTAGGATGGGTGACCACCTGGGAAGTCCTCGTGCTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* * *
21045 C---AT-TTTTTTTTCTCATTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * * * *
21065 TATTATTTTATTTATCGCAAATTTACAATTTTGTGAAATAATAAAGCTTCATGGGATAAATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
21130 TTTATTAGCGTATTTGTATTTTATTTTTATCTGCGAAAGTACGTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * * *
21195 ATATTTACATTTAAATTCGAGGCACTAATGGGATGAAAGGTAACCTTTACGTAAATAGAATGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
** * *
21260 AGAGGATAATGAGTGCGATCATACCAGCACTTATGCACCGGATCCCATCAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * * * *
21325 GTGTGCTTGGGAGAAAGTAGTACTAGGATGTGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCTT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
21390 CTTTTTG--TTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* *
21412 TATTATTTTATTTATCGTAAAATTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
21477 ATTATTAGAGTATTTTTATTTTATTTTTATCTGTGAAAATACTTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * ** *
21542 ATATTTACATTCAAATTCGAGGCAGGAATGGGATGAAAGGTCA-TCTTTACATAAATAGAATGCG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT-AGCCTTTATGTAAATAGATTGCG
* * * * * *
21606 CAGAGCATAATGGGTGTGATCATACCAGCACTAATGCATCGGATCCCATCAAAACTTCGCAGTGA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * *
21671 AGCTTGCTTGGGTGAGAGTTGTACTAAGATGGGTGACCTCCTGGGAAGTCCTCCTGTTGCATCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
21736 TCTTTTTG-TTTTTTTTCCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* *
21760 TATTATTTTATTTATCGTAAATTTACAATTTTGCTAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
21825 ATTATTAGAC-TATTTTTATTTTATTTTTATCCGTGAAAATACTTCTTCCCGAGCATTATTCGAG
66 ATTATTAG-CGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGG
* ** *
21889 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTCA-TCTTTACATAAATAGAATGC
129 TATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT-AGCCTTTATGTAAATAGATTGC
* * * * * * *
21953 GCAGAGCATAATGGGTGTGATCATACCAGCACTAATGCATCGGATCCCATCAAAACTTCGCACTG
193 GCAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTT
* * * * * * *
22018 AAGCTTGCTTGGGTGAGAGTAGTACTAGTATGGGTGACCTCTTGGGAAGTCCTCCTGCTGCACCC
258 AAGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
*
22083 CTCTTTTTGTTTTTTTTTTTCTTTTTT
323 CTCTTTTTG-TTTTTTTTTTCTTTTTG
* *
22110 TATTATTTTATTTATCGTAAATTTGCAATTTTACGAAATAGTAAAGCTTCATGGGATATATGAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* ** *
22175 ATTATTAGCGTATTTTTATTTTATTTTTATTCGTAAAAATTCGTCTTCCCGAGCATTGTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * **
22240 ATTTTTACGTTCAAATTCGAGGCACGAATGGGATGAAAGGTAATCTTTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * *
22305 AAAACATAATGGGTGCGATCGTACCAACACTAATGCACTGAATCACATCAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * *
22370 GCGTGCTTGGGCGAGAGTAGTACTAGGATCGGTGACCTCCTGGGAAGTCCTCGTGCTGCACCCCT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
*
22435 CATTTTG--TTTTTTTTCTTTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
*
22457 TATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* ** *
22522 ATTATTAGAGTATTTTTATTTTATTTTTATCCGTTAAAATACTTCTTCCCGAGCATTATTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * * ** *
22587 ATATTTACATTCAAATTTGAGGCACGAACGGGATGAAAGGTCA-TCTTTACATAAATAGAATGCG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT-AGCCTTTATGTAAATAGATTGCG
* * * * * *
22651 CAGATCATAATGGGCGTGATCATACCAGCACTAATGCATCGGATCCCATCAAAACTCCGCAGTGA
194 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTA
* * * * * * * *
22716 AACGTGCTTGGGTGAGAGTAGTACTAGCATGGGTGACCTCCTAGTAACTCCTCTTGTTGCACCCC
259 AGCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
*
22781 TC------TTTTTTGTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
* * *
22800 TATTATTTTATTTATCGTAAATTTGCAATTTTGTGAAATAGTAAAGCTTCACGAGATATATGGAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * *
22865 ATTATTAGCGTATTTTTAGTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGGA
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATT-TTTGGGT
* * *
22930 ATATTTACATTCAAATTTGAGGCACGAATGGGATGAGAGGTAGCCTCTATGTAAATAGATTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * *
22995 AAAACATAATGGGTGCGATCATACCATCACTAATGTACCGGATCGCATCAGAACCCCGTAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * ** *
23060 GCGTGCCT-ATGCGAGAGTAGTATTAGGATGGGTGACCTTTTGGGAAGTCCTCGTG-T-CACACC
260 GCGTGCTTGA-GCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* * *
23122 -CATCTT-TTTTATTTTTCTTTTTG
324 TCTTTTTGTTTTTTTTTTCTTTTTG
** * *
23145 TATTATTTTATTTATCGTAAATTTTAAATTTTGAGAAATAGTAAA-CTTCATGGGATATATGAAC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
** *
23209 ATTATTAGCGTATTTTTATTTTATTTTTATCTACGAAAATACGTCTTCCCGTGCACTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * *
23274 ATATTTACATTCAAATTCAAGGCACGAATGGGTTGAAAGGTAGCCTTTATGTAAATAGACTGCGC
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * * * * * *
23339 AAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCACATTAGAACTCAGCAATTAT
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
* * * *
23404 GCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCTT
260 GCGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
23469 CTTTTTG-CTTTTTTTTCTCTTTG
325 CTTTTTGTTTTTTTTTTCTTTTTG
* * *
23492 TATTATTTTATTTATTGTAAATTTGCAATTTTGCGAAATAATAAAGCTTCATGGGATATATGGGC
1 TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
* * * *
23557 ATTATTAGCATATTTTTATTTTATTGTTATCCACGAAAATACGTCTTCCCAAGCATTTTTTGGGT
66 ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCA-TTTTTGGGT
* * * * *
23622 ATATTTACATTCAAATTCGAGGCACAAATGGGTTGAAAGGTATCCATTATGTAAATAGATTGCGG
130 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
* * * * *
23687 AAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTAA
195 AGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAA
23752 G
260 G
Statistics
Matches: 15664, Mismatches: 2999, Indels: 1740
0.77 0.15 0.09
Matches are distributed among these distances:
328 1 0.00
329 2 0.00
330 291 0.02
331 8 0.00
332 327 0.02
333 107 0.01
334 77 0.00
335 514 0.03
336 76 0.00
337 481 0.03
338 140 0.01
339 107 0.01
340 19 0.00
341 148 0.01
342 31 0.00
343 712 0.05
344 979 0.06
345 1491 0.10
346 985 0.06
347 1692 0.11
348 2685 0.17
349 1881 0.12
350 1702 0.11
351 19 0.00
353 1 0.00
354 11 0.00
355 8 0.00
356 8 0.00
357 4 0.00
358 4 0.00
359 16 0.00
360 11 0.00
361 12 0.00
362 17 0.00
363 13 0.00
364 23 0.00
365 14 0.00
366 19 0.00
367 17 0.00
368 28 0.00
369 12 0.00
370 5 0.00
371 10 0.00
372 14 0.00
373 25 0.00
374 17 0.00
375 14 0.00
376 12 0.00
377 19 0.00
378 12 0.00
379 18 0.00
380 21 0.00
381 17 0.00
382 4 0.00
383 5 0.00
384 10 0.00
385 20 0.00
386 29 0.00
387 16 0.00
388 17 0.00
389 161 0.01
390 115 0.01
391 19 0.00
392 18 0.00
393 25 0.00
394 12 0.00
395 4 0.00
396 8 0.00
397 9 0.00
398 4 0.00
399 17 0.00
400 20 0.00
401 14 0.00
402 16 0.00
403 10 0.00
404 12 0.00
405 13 0.00
406 4 0.00
407 7 0.00
408 8 0.00
409 8 0.00
410 6 0.00
411 11 0.00
412 9 0.00
413 17 0.00
414 19 0.00
415 14 0.00
416 8 0.00
417 10 0.00
418 3 0.00
419 1 0.00
421 6 0.00
422 2 0.00
423 2 0.00
424 8 0.00
425 9 0.00
426 18 0.00
427 2 0.00
428 7 0.00
429 20 0.00
430 5 0.00
431 3 0.00
432 2 0.00
ACGTcount: A:0.27, C:0.16, G:0.20, T:0.36
Consensus pattern (348 bp):
TATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGAC
ATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTGGGTA
TATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGCA
GAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGTTAAG
CGTGCTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCTC
TTTTTGTTTTTTTTTTCTTTTTG
Found at i:11892 original size:17 final size:17
Alignment explanation
Indices: 11859--11892 Score: 50
Period size: 17 Copynumber: 2.0 Consensus size: 17
11849 GTTGCACCCC
* *
11859 TCTTTTTGTTTTTTTTT
1 TCTTTTTGTATTATTTT
11876 TCTTTTTGTATTATTTT
1 TCTTTTTGTATTATTTT
11893 ATTTATCGAA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.06, C:0.06, G:0.06, T:0.82
Consensus pattern (17 bp):
TCTTTTTGTATTATTTT
Found at i:12576 original size:17 final size:17
Alignment explanation
Indices: 12543--12576 Score: 50
Period size: 17 Copynumber: 2.0 Consensus size: 17
12533 GTTGCACCCC
* *
12543 TCTTTTTGTTTTTTTTT
1 TCTTTTTGTATTATTTT
12560 TCTTTTTGTATTATTTT
1 TCTTTTTGTATTATTTT
12577 ATTTATCGAA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.06, C:0.06, G:0.06, T:0.82
Consensus pattern (17 bp):
TCTTTTTGTATTATTTT
Found at i:15851 original size:346 final size:346
Alignment explanation
Indices: 15184--16621 Score: 1843
Period size: 346 Copynumber: 4.2 Consensus size: 346
15174 GGGTGACCTT
* **
15184 CTCGTGTTGCA-CCC-ATTTTTTTTAATTTTCTTTTTGTATTATTTTATTTATCGAAAATTTCCA
1 CTCGTGTTGCACCCCTCTTTTTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGAAAATTTCCA
*
15247 ATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGAATTTTTATTTTATTTT
66 ATTTTGCGAAATAGTAAAGCTTCATGGGA-ATATGGACATTATTAGCGTATTTTTATTTTATTTT
* * * * ** * *
15312 TATGCGCGATAATACTTGTTCACGAGCATTTTTTGCCTATATTTATAATCAAATTTGAGGCACAA
130 TATCCGCGAAAATACATGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACAA
* * **
15377 ATTGGATGAAACGTAACCTTTATATATATAGATTGTACAGAACATAATGGATGCGATCATACCAG
195 ATGGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACATAATGGATGCGATCATACCAG
*
15442 CACTAATGCACCGGATCCCATCAGAACTCCGCAACTAAGCGTGCTTGGGAGAGAG-AGGTACTAG
260 CACTAATGCACCGGATCCCATCAGAACTCCGCAGCTAAGCGTGCTTGGGAGAGAGTA-GTACTAG
* *
15506 GATTCGTGACGTCTTGGGAAGTC
324 GATGCGTGACGTCCTGGGAAGTC
* *
15529 CTCGTGTTGCACCCCTCTTTTTGTTTTTTTTTCTTTTTGTATTATTTTATTTATCGAAGATTTTC
1 CTCGTGTTGCACCCCTCTTTTT-TTTTTTTTTCTTTTTGTATTATTTTATTTATCGAAAATTTCC
*
15594 AATCTTGCGAAATAGTAAAGCTTCATGGG-ATATGGACATTATTAGCGTATTTTTATTTTATTTT
65 AATTTTGCGAAATAGTAAAGCTTCATGGGAATATGGACATTATTAGCGTATTTTTATTTTATTTT
* * * * * *
15658 TATCCGCGAAAATACATCTTCCCGAGCATTATTTGGGTCTATTTGCATTCAAATTCGAGGCACGA
130 TATCCGCGAAAATACATGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACAA
** * * * * * * *
15723 ATGGGATGGGAGGTAGCCTCTATGTAAATGGATTGCGCAGATCATAATGGATGCGATCATACCAT
195 ATGGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACATAATGGATGCGATCATACCAG
* * * * *
15788 CACTAATGCACTGGATCGCATCAGAAC-CACGCAGTTAAGCGTGCTTAGGCGAGAGTAGTACTAG
260 CACTAATGCACCGGATCCCATCAGAACTC-CGCAGCTAAGCGTGCTTGGGAGAGAGTAGTACTAG
* * * *
15852 GATGGGTAACTTTCTGGGAAGTC
324 GATGCGTGACGTCCTGGGAAGTC
* *
15875 CTCGTGTTGCACCCATC--TTTTTTATTTTTCTTTTTGTATTATTTTATTTATC-ATAAATTTCC
1 CTCGTGTTGCACCCCTCTTTTTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGA-AAATTTCC
* *
15937 AATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGTGTATTTTTATTTTATCT
65 AATTTTGCGAAATAGTAAAGCTTCATGGGA-ATATGGACATTATTAGCGTATTTTTATTTTATTT
* * * *
16002 TTATGCGTGAAAATACCTGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACG
129 TTATCCGCGAAAATACATGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACA
* * *
16067 AATTGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACAAAATGGGTGCGATCATACCA
194 AATGGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACATAATGGATGCGATCATACCA
* *
16132 GCACTAATGCACCTGATCCCATCAGAACTCCGCAGCTAAG-GTTGCTTGGGAGAGAGTCGTACTA
259 GCACTAATGCACCGGATCCCATCAGAACTCCGCAGCTAAGCG-TGCTTGGGAGAGAGTAGTACTA
*
16196 GGATTCGTGACGTCCTGGGAAGTC
323 GGATGCGTGACGTCCTGGGAAGTC
* * *
16220 CTCGTGTTGCACCCCTCTTTCTGTTTTTTTTTCTTTTTGTATTATTTTATTTATCAAAAATTTAC
1 CTCGTGTTGCACCCCTCTTT-TTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGAAAATTTCC
*
16285 AATTTTACGAAATAGTAAAGCTTCATGGG-ATATGGACATTATTAGCG-----------TATTTT
65 AATTTTGCGAAATAGTAAAGCTTCATGGGAATATGGACATTATTAGCGTATTTTTATTTTATTTT
* * * * * *
16338 TATCCGCGAAAATACGTATTCCCGTGCA-TTTTTGGGTATAATTGCATTCAAATTCGAGGCACAA
130 TATCCGCGAAAATACATGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACAA
* * * * * *
16402 ATGGGATGAAAGGTAGCCATTATGTAAATAGGTTGCGCAGAACATAAT-GAGTGCGATCATTCCA
195 ATGGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACATAATGGA-TGCGATCATACCA
* *
16466 GCAGTAATGCACCGGATCCCATCAGAACTCCGCAGCTAAGCGTGCTTGGGCGAGAGTAGTACTAG
259 GCACTAATGCACCGGATCCCATCAGAACTCCGCAGCTAAGCGTGCTTGGGAGAGAGTAGTACTAG
* * * *
16531 GATGGGTGACCTCCTGGGTAGTT
324 GATGCGTGACGTCCTGGGAAGTC
*
16554 CTCGTGTTGCA-CCC-C---TTTTTTTTTTTCATTTTTGTATTATTTTATTTATCGAAAATTTGC
1 CTCGTGTTGCACCCCTCTTTTTTTTTTTTTTC-TTTTTGTATTATTTTATTTATCGAAAATTTCC
16614 AATTTTGC
65 AATTTTGC
16622 NNNNNNNNNN
Statistics
Matches: 953, Mismatches: 123, Indels: 50
0.85 0.11 0.04
Matches are distributed among these distances:
328 11 0.01
329 37 0.04
332 1 0.00
333 4 0.00
334 173 0.18
335 29 0.03
342 1 0.00
343 65 0.07
344 4 0.00
345 242 0.25
346 245 0.26
347 7 0.01
348 133 0.14
349 1 0.00
ACGTcount: A:0.27, C:0.17, G:0.20, T:0.36
Consensus pattern (346 bp):
CTCGTGTTGCACCCCTCTTTTTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGAAAATTTCCA
ATTTTGCGAAATAGTAAAGCTTCATGGGAATATGGACATTATTAGCGTATTTTTATTTTATTTTT
ATCCGCGAAAATACATGTTCCCGAGCATTTTTTGGGTATATTTACAATCAAATTCGAGGCACAAA
TGGGATGAAACGTAACCTTTATATAAATAGATTGCGCAGAACATAATGGATGCGATCATACCAGC
ACTAATGCACCGGATCCCATCAGAACTCCGCAGCTAAGCGTGCTTGGGAGAGAGTAGTACTAGGA
TGCGTGACGTCCTGGGAAGTC
Found at i:18309 original size:17 final size:17
Alignment explanation
Indices: 18276--18309 Score: 50
Period size: 17 Copynumber: 2.0 Consensus size: 17
18266 GTTGTACTCC
* *
18276 TCTTTTTGTTTTTTTTT
1 TCTTTTTGTATTATTTT
18293 TCTTTTTGTATTATTTT
1 TCTTTTTGTATTATTTT
18310 ATTTTTCGAA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.06, C:0.06, G:0.06, T:0.82
Consensus pattern (17 bp):
TCTTTTTGTATTATTTT
Found at i:19683 original size:18 final size:18
Alignment explanation
Indices: 19649--19683 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
19639 GCTGCACCCC
* *
19649 TCTTTTTGTTTTTTTTTT
1 TCTTTTTGTATTATTTTT
19667 TCTTTTTGTATTATTTT
1 TCTTTTTGTATTATTTT
19684 ATTTATTGTA
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 15 1.00
ACGTcount: A:0.06, C:0.06, G:0.06, T:0.83
Consensus pattern (18 bp):
TCTTTTTGTATTATTTTT
Found at i:20077 original size:698 final size:696
Alignment explanation
Indices: 16688--23752 Score: 9204
Period size: 698 Copynumber: 10.2 Consensus size: 696
16678 NNNNNNNNNN
* *
16688 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGCTAGCCTTTATGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* ** * * * * * *
16753 AGAATGTAATGAGTGCGATTATACCAGCACTAATGCACCGGATCCCGTCAGAACTCTGCTGATAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* * * * *
16818 GTGTGCTTGGGTGAGAGTTGTACTACGATGGGTGACCTCCTAGGAAGTCCTCGTGTTGCACCCTT
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* * *
16883 CTTTTTGTTTTTTTTTTCTTTTGGTATTATTTTATTTATCGTAAATTTACAATTTTACGAAATAG
196 CTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAG
* *
16948 TAAAGCTTCACGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAGATA
261 TAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATA
** *
17013 CGTCTTCCCGATAATTTTTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT
326 CGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT
* * * *
17078 AACCTTTATGTAAATCGATTGCGCAAAACATAATGGGTGCGATCATACGAGCACTAATGCACCGG
391 AGCCTTTATGTAAATAGAATGCGC-AAACATAATGGGTGCGATCATACCAGCACTAATGCACCGG
* * * **
17143 ATCCCATAAGAACTCTGCAGTCAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTTTT
455 ATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCT
*
17208 GGGAAGTCCTCGTGTTGCACCCCTCTTTTT-CTTTTTCTTTTTTCCTTTTTGTATTATTTTATTT
520 GGGAAGTCCTCGTGTTGCACCCTTCTTTTTGC---TT-TTTTTT-CTTTTTGTATTATTTTATTT
* * * *
17272 ATCGTAAATTTGCAATTTTGTGAAATAGTAAAGCTTCTTGGGATATTTGGGCATTATTAGCGTAT
580 ATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTAT
* * *
17337 TTTTATTTTATTTTTGTCCACGAAAATACGTCTTCCCGAGCATTTTTTAGGT
645 TTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * **
17389 ATATTTACATTCAAATTCGAGGCACGAATGGAATGAAAGGTGACCTTTATGTAAATAGATTATGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * * *
17454 AAAACATAATGGTTGTGATCATACTAGCAATAATGCATCGGATCCCATTAGAACTCCGCA-ATTA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGA-TA
* * * *
17518 AGCGTGCTTGAGCGAGA-TTAGTACAAGGATGGGTGACCTCCTGGCAAATCCTCGTGTTGCACCC
130 AGCGTGCTTGGGCGAGAGTT-GTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCC
* * *
17582 CTCTTTTTG--TTTTTTTT-TTATTGTATTATTTTATTTATCGTAAATTTGTAATTTTGCGGAAT
194 CTCTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAAT
*
17644 AGTAAAGCTTCATGGAATATATGGACATTATTTTAGCGTATTTTTATTTTATTTTTATCCGCGAA
259 AGTAAAGCTTCATGGGATATATGGACATTA--TTAGCGTATTTTTATTTTATTTTTATCCGCGAA
* * * * ** **
17709 AGTATGTCTTCCCGAGCATTATTTGGGTATATTTACATTTAAATTCAAGGCACGAATGATATGGG
322 AATACGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAA
* * * * * *
17774 AGGTAGCCTCTATATAAATGGATTGCGTAGAACATAATGGGTGCGATCATACCATCACTAATGCA
387 AGGTAGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCA
* * * **
17839 CTGGATCGCATCAGAA-TCACGCAGTTAAGCGTGCTTAGGTAAGAGTAGTACTAGGATGGGTGAC
451 CCGGATCCCATCAGAACTCA-GCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGAC
** * * *
17903 CTTTTGGGAAGTCCTCGTGTTGCACCCATC-TTTT--TTATTTTTATTTTTGTATTATTTTATTT
515 CTCCTGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTT
* *
17965 ATCGAAAATTTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTAT
580 ATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTAT
** * * * **
18030 TTTTATTTTATTTTTATGTGCGAAAATACTTGTTCCCGAGCAGTTTTTGCCT
645 TTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * * * *
18082 ATATTTACAATCAAATTCGAGGCAC-ACATTGGATGAAACGTAACCTTTATATAAATAGATTGTG
1 ATATTTACATTCAAATTCGAGGCACGA-ATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCG
* * *
18146 CAGAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGCAGCTA
65 CAAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATA
* * * * * ** * * *
18211 CGGGTGCTTGGGAGAGAGTGGTACTATGATTCGTGACGTCCTGGGAAGTCCTCGTGTTGTACTCC
130 AGCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* *
18276 TCTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTTTCGAAAATTTGCAATTTTGCGAAATA
195 TCTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATA
18341 GTAAAGCTTCATGGG--ATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAAT
260 GTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAAT
* * * * *
18404 ACGTCTTCCCGTGCATT-TTTGGGTATATTTACATTTAAATTCGAAGCACAAATGGAATGAAAGG
325 ACGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGG
* * ** *
18468 TAACCTTTATGTAAATAG-ATTCTGCAAAACATAATGGGTGTAATCATACTAGCACTAATGCACC
390 TAGCCTTTATGTAAATAGAATGC-GC-AAACATAATGGGTGCGATCATACCAGCACTAATGCACC
* * * *
18532 GGATCCCATCAAAACTCTGCAATTAAGCGTGCATGGGCGAGAGTAGTACTAGGATGGGTGACCTC
453 GGATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTC
* * * *
18597 CTTGGAAGTCCTTGTGCTGCA--C-TCTTTTTGTTTTTTTTTC-TTTTGTATTATTTTATTTATC
518 CTGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATC
* * * * *
18658 GAAAATTTGCAATTTTGCGAAATAATAAAGCTTCTTGGGATATATGGACATTAATAGCATATTTT
583 GTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTT
* * * *
18723 TCTTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGTT
648 TATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * *
18772 ATATTTACATTCAAATTTGAGGCACGAATAGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * **
18837 AAAACGTAATGAGTGCGATCATACCAGCACTAATGCACCGGATCCC-TTCAGAACTCTGTTGATA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATT-AGAACTCCGCAGATA
* * * *
18901 AGGGTGCTTGGGTGAGAGTTGTACT---A---GT-A-----TGAGAAGTCCTCATGTTGCACCCC
130 AGCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* *
18954 TCTTTTTGTTTTTTTTTTCTTTTTGAATTATTTTATTTATCGTGAATTT-CTAATTTTGCGAAAT
195 TCTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGC-AATTTTGCGAAAT
* * *
19018 ACTAAAGGTTCATGGGATATATGGACAATATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAA
259 AGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAA
* *
19083 TAAGTCTTCCCGAGCATTATTTGGGTATATTTGCATTCAAATTCGAGGCACGAATGGGATGAAAG
324 TACGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAG
* * * * *
19148 CTAGCC-TTATGTAAATAG-ATGCGCAGAACATAATGAGCGCAATCATTCCAGCACTAATGCACC
389 GTAGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCACC
* * *
19211 GGATCCCATCAGAACTCCGCAGCTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTTACCTC
453 GGATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTC
* * *
19276 GTGGGAAGTCCTCGTGTTGCACCCTTCTTCTTT-CTTTTTTTTCTTTTGGTGTTATTTTATTTAT
518 CTGGGAAGTCCTCGTGTTGCACCCTTCTT-TTTGCTTTTTTTTCTTTTTGTATTATTTTATTTAT
* *
19340 CGTAAATTTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGATATTATTAGCGTATTT
582 CGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTT
* * * *
19405 TTATTTTATTTTTACCCGCGAAGATACGTCTTCTCGAGAATTTTTTGGGT
647 TTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
*
19455 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTGTGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * * * * *
19520 AAAACATAATGAGTGCGATCATACTAGCAGTAATTCATCAGATCCCATTAGAACTCCACAGATAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* * * * * *
19585 TCGTGCTTGGGCGAGACTTGTACAAGGATGGGTAACCTCCTGGGAAGTCATCGTGCTGCACCCCT
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* * *
19650 CTTTTTGTTTTTTTTTTTCTTTTTGTATTATTTTATTTATTGTAAATTTGTAATTTTGTGAAATA
196 CTTTTTG-TTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATA
* **
19715 GTAAAGCTTCATGGGATATATGGGCATTATTAGCGTATTTTTATTTTATTTTTATCTACGAAAAT
260 GTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAAT
* *
19780 ACGTCTTCCCGTGCACTT-TTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGTTGAAAG
325 ACGTCTTCCCGAGCA-TTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAG
* * * *
19844 GTAGCCTTTATGTAAATAGACTGCGCAAACCATAATGGGTGCGATCATACTAGCAGTAATGCATC
389 GTAGCCTTTATGTAAATAGAATGCGCAAA-CATAATGGGTGCGATCATACCAGCACTAATGCACC
* * * * * *
19909 GGATCACATTAGAACTCAGCAATTATGCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTC
453 GGATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTC
*
19974 CTGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATT
518 CTGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATC
* * *
20039 GTAAATTTGCAATTTTGCGAAATAATAAAGCTTCATGGGATATATGGGCATTATTAGCATATTTT
583 GTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTT
* * *
20104 TATTTTATTGTTATCCACGAAAATACGTCTTCCCAAGCATTTTTTGGGT
648 TATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * * * *
20153 ATATTTACATTCAAATTCGAGGCACAAATGGGTTGAAAGGTATCCATTATGTAAATAGATTGCGG
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * *
20218 AAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* * * *
20283 GCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCCTGGGGAGTCCT-GATGTTGCACCCC
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCG-TGTTGCACCCC
**
20347 TCTTTTTGTTTTTTTTTTTCTGATTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAAT
195 TCTTTTTG-TTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAAT
* * *
20412 AGTAAAGCTCCAT-GGA-GTATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGTGAAAA
259 AGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAA
* * *
20475 TACGTCTTCTCGAGCATTATTTGGGTATATTTACAATCAAATTCGAGGGACGAATGGGATGAAAG
324 TACGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAG
* * * * * *
20540 GTAGCCTTTATGGAAACAGATTGTGCAGAACATAATGAGTGCGATCATACCAGCACAAATGCACC
389 GTAGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCACC
* ** * ** * * *
20605 GGATCCCATCAGAACTCTGTTGATAAGCGTGCTAAGGTGAGAGTTGTACTAGTATGGGTGACCTC
453 GGATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTC
* * * * * *
20670 CTAGGAAGTCCTTGTGTTGTACCAC-TCTGTTTGTTTTTTTTCTTCTTTTTGCATTATTTTATTT
518 CTGGGAAGTCCTCGTGTTGCACC-CTTCTTTTTG-CTTTTTT-TTCTTTTTGTATTATTTTATTT
* *
20734 ATCGTGAATTTGTAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTAT
580 ATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTAT
* *
20799 ATTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTATTTGGGT
645 TTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* *
20851 ATATTTACATTCAACTTCGAGGCACGAATGGGATGAAAGGTAGCCTTTATGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * **
20916 AAAACATAATGAGTGCGATCATTCCAGCACTAATGCACCGGATCCCATTAGAACTCTGTTGATAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* * *
20981 GCGTGCTTGGGTGAGAGTT-TACTAGGATGGGTGACCACCTGGGAAGTCCTCGTGCTGCACCCCT
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* * * * * * *
21045 C---AT-TTTTTTTTCTCATTTTGTATTATTTTATTTATCGCAAATTTACAATTTTGTGAAATAA
196 CTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAG
* * * * *
21106 TAAAGCTTCATGGGATAAATGGACTTTATTAGCGTATTTGTATTTTATTTTTATCTGCGAAAGTA
261 TAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATA
* *
21171 CGTCTTCCCGAGCATTATTTGGGTATATTTACATTTAAATTCGAGGCACTAATGGGATGAAAGGT
326 CGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT
* * ** * *
21236 AACCTTTACGTAAATAGAATGCGCAGAGGATAATGAGTGCGATCATACCAGCACTTATGCACCGG
391 AGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCACCGG
* * * * *
21301 ATCCCATCAGAACTCCGCAGTTAAGTGTGCTTGGGAGAAAGTAGTACTAGGATGTGTGACCTCCT
455 ATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCT
21366 GGGAAGTCCTCGTGTTGCACCCTTCTTTTTG-TTTTTTTTCTTTTTGTATTATTTTATTTATCGT
520 GGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATCGT
* * *
21430 AAAATTACAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGAGTATTTTTA
585 AAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTA
* * * *
21495 TTTTATTTTTATCTGTGAAAATACTTCTTCCCGAGCATTATTTGGGT
650 TTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * * ** *
21542 ATATTTACATTCAAATTCGAGGCAGGAATGGGATGAAAGGTCATCTTTACATAAATAGAATGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * * * * *
21607 AGAGCATAATGGGTGTGATCATACCAGCACTAATGCATCGGATCCCATCAAAACTTCGCAG-TGA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGAT-A
* * * * *
21671 AGCTTGCTTGGGTGAGAGTTGTACTAAGATGGGTGACCTCCTGGGAAGTCCTCCTGTTGCATCCC
130 AGCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
* * *
21736 TCTTTTTG-TTTTTTTTCCTTTTTGTATTATTTTATTTATCGTAAATTTACAATTTTGCTAAATA
195 TCTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATA
*
21800 GTAAAGCTTCATGGGATATATGGACATTATTAGAC-TATTTTTATTTTATTTTTATCCGTGAAAA
260 GTAAAGCTTCATGGGATATATGGACATTATTAG-CGTATTTTTATTTTATTTTTATCCGCGAAAA
* * *
21864 TACTTCTTCCCGAGCATTATTCGAGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAG
324 TACGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAG
* ** * * *
21929 GTCA-TCTTTACATAAATAGAATGCGCAGAGCATAATGGGTGTGATCATACCAGCACTAATGCAT
389 GT-AGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCAC
* * * * * *
21993 CGGATCCCATCAAAACTTC-GCACTGAAGCTTGCTTGGGTGAGAGTAGTACTAGTATGGGTGACC
452 CGGATCCCATCAGAAC-TCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACC
* * * * * *
22057 TCTTGGGAAGTCCTCCTGCTGCACCCCTCTTTTTGTTTTTTTTTTTCTTTTTTTATTATTTTATT
516 TCCTGGGAAGTCCTCGTGTTGCACCCTTCTTTTTG--CTTTTTTTTCTTTTTGTATTATTTTATT
* *
22122 TATCGTAAATTTGCAATTTTACGAAATAGTAAAGCTTCATGGGATATATGAACATTATTAGCGTA
579 TATCGTAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTA
* ** * *
22187 TTTTTATTTTATTTTTATTCGTAAAAATTCGTCTTCCCGAGCATTGTTTGGGT
644 TTTTTATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * *
22240 ATTTTTACGTTCAAATTCGAGGCACGAATGGGATGAAAGGTAATCTTTATGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * * * * *
22305 AAAACATAATGGGTGCGATCGTACCAACACTAATGCACTGAATCACATCAGAACTCCGCAGTTAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* * *
22370 GCGTGCTTGGGCGAGAGTAGTACTAGGATCGGTGACCTCCTGGGAAGTCCTCGTGCTGCACCCCT
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* *
22435 CATTTTG--TTTTTTTTCTTTTTGTATTATTTTATTTATCGAAAATTTGCAATTTTGCGAAATAG
196 CTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAG
* **
22498 TAAAGCTTCATGGGATATATGGACATTATTAGAGTATTTTTATTTTATTTTTATCCGTTAAAATA
261 TAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATA
* * *
22563 CTTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTTGAGGCACGAACGGGATGAAAGGT
326 CGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT
* ** * * * *
22628 CA-TCTTTACATAAATAGAATGCGCAGATCATAATGGGCGTGATCATACCAGCACTAATGCATCG
391 -AGCCTTTATGTAAATAGAATGCGCA-AACATAATGGGTGCGATCATACCAGCACTAATGCACCG
* * * * * *
22692 GATCCCATCAAAACTCCGCAGTGAAACGTGCTTGGGTGAGAGTAGTACTAGCATGGGTGACCTCC
454 GATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCC
* * * * * *
22757 TAGTAACTCCTCTTGTTGCACCC--C-TCTT--TTTTGTTTCTTTTTGTATTATTTTATTTATCG
519 TGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATCG
* * *
22817 TAAATTTGCAATTTTGTGAAATAGTAAAGCTTCACGAGATATATGGACATTATTAGCGTATTTTT
584 TAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTT
* * * *
22882 AGTTTATTTTTATCCGTGAAAATACGTCTTCCCGAGCATTATTTGGGA
649 ATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * * *
22930 ATATTTACATTCAAATTTGAGGCACGAATGGGATGAGAGGTAGCCTCTATGTAAATAGATTGCGC
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * * * * *
22995 AAAACATAATGGGTGCGATCATACCATCACTAATGTACCGGATCGCATCAGAACCCCGTAGTTAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
* ** * * ** *
23060 GCGTGCCTATGCGAGAGTAGTATTAGGATGGGTGACCTTTTGGGAAGTCCTCGTG-T-CACACC-
131 GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
* * * ** *
23122 CATCTT-TTTTATTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTTAAATTTTGAGAAATAG
196 CTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAG
* **
23186 TAAA-CTTCATGGGATATATGAACATTATTAGCGTATTTTTATTTTATTTTTATCTACGAAAATA
261 TAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATA
* * *
23250 CGTCTTCCCGTGCACTT-TTTGGGTATATTTACATTCAAATTCAAGGCACGAATGGGTTGAAAGG
326 CGTCTTCCCGAGCA-TTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGG
* * * *
23314 TAGCCTTTATGTAAATAGACTGCGCAAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCG
390 TAGCCTTTATGTAAATAGAATGCGC-AAACATAATGGGTGCGATCATACCAGCACTAATGCACCG
* * * * * *
23379 GATCACATTAGAACTCAGCAATTATGCGTGCTTGGGCGAGACTAGTACAAGGATGGGTGACCTCC
454 GATCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCC
* *
23444 TGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTCTTTGTATTATTTTATTTATTG
519 TGGGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATCG
* * *
23509 TAAATTTGCAATTTTGCGAAATAATAAAGCTTCATGGGATATATGGGCATTATTAGCATATTTTT
584 TAAATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTT
* * *
23574 ATTTTATTGTTATCCACGAAAATACGTCTTCCCAAGCATTTTTTGGGT
649 ATTTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
* * * * *
23622 ATATTTACATTCAAATTCGAGGCACAAATGGGTTGAAAGGTATCCATTATGTAAATAGATTGCGG
1 ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
* * * *
23687 AAAACATAATGGGTGCGATCATACTAGCAGTAATGCATCGGATCCCATTAGAACTCCGCAGTTAA
66 AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
23752 G
131 G
Statistics
Matches: 5571, Mismatches: 708, Indels: 179
0.86 0.11 0.03
Matches are distributed among these distances:
677 1 0.00
678 93 0.02
679 110 0.02
680 77 0.01
681 46 0.01
682 13 0.00
683 254 0.05
684 4 0.00
686 2 0.00
687 239 0.04
688 65 0.01
689 10 0.00
690 554 0.10
691 420 0.08
692 404 0.07
693 292 0.05
694 257 0.05
695 345 0.06
696 462 0.08
697 384 0.07
698 1128 0.20
699 16 0.00
700 227 0.04
701 168 0.03
ACGTcount: A:0.27, C:0.16, G:0.20, T:0.37
Consensus pattern (696 bp):
ATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGTAACCTTTATGTAAATAGATTGCGC
AAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGATCCCATTAGAACTCCGCAGATAA
GCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCCT
CTTTTTGTTTTTTTTTTCTTTTTGTATTATTTTATTTATCGTAAATTTGCAATTTTGCGAAATAG
TAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTATTTTATTTTTATCCGCGAAAATA
CGTCTTCCCGAGCATTATTTGGGTATATTTACATTCAAATTCGAGGCACGAATGGGATGAAAGGT
AGCCTTTATGTAAATAGAATGCGCAAACATAATGGGTGCGATCATACCAGCACTAATGCACCGGA
TCCCATCAGAACTCAGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTG
GGAAGTCCTCGTGTTGCACCCTTCTTTTTGCTTTTTTTTCTTTTTGTATTATTTTATTTATCGTA
AATTTGCAATTTTGCGAAATAGTAAAGCTTCATGGGATATATGGACATTATTAGCGTATTTTTAT
TTTATTTTTATCCGCGAAAATACGTCTTCCCGAGCATTTTTTGGGT
Done.