Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011128.1 Kokia drynarioides strain JFW-HI SEQ_126101, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72536

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9878--10029
58
2.6
56
79
8
153
26
13
11
48
1.77
12317--12375
27
2.2
27
78
0
64
25
6
11
55
1.60
23516--23560
7
6.6
7
89
5
56
13
17
28
40
1.88
23524--23565
20
2.1
20
86
0
57
11
19
26
42
1.85
25576--25624
25
2.0
24
84
4
62
10
14
10
65
1.47
26007--26059
15
4.1
13
75
24
58
43
0
0
56
0.99
26355--26441
44
2.0
44
100
0
174
19
18
18
43
1.88
27234--27297
30
2.2
30
85
2
85
62
14
14
9
1.54
38525--38562
17
2.2
18
95
4
69
39
0
2
57
1.12
38990--39048
31
1.9
31
85
0
82
37
13
8
40
1.75
40863--41095
30
7.8
30
78
6
181
34
23
7
34
1.82
40874--41095
60
3.7
59
78
10
225
36
22
6
34
1.81
40891--41100
90
2.3
90
80
6
246
35
22
6
34
1.81
41379--41408
15
2.0
15
100
0
60
60
0
0
40
0.97
41450--41749
104
2.8
105
80
6
277
31
14
17
36
1.90
45414--45462
19
2.7
17
84
12
62
83
0
16
0
0.64
45418--45463
14
3.4
13
82
11
65
82
0
17
0
0.67
45412--45464
10
5.6
10
75
18
51
83
0
16
0
0.66
45412--45464
23
2.3
23
87
9
72
83
0
16
0
0.66
45497--45550
7
7.3
7
78
19
56
81
0
16
1
0.78
45503--45563
30
2.0
30
90
3
95
77
0
16
6
0.98
45420--45584
87
1.9
83
82
4
204
64
6
16
12
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46365--46409
12
3.5
13
84
6
56
88
0
8
2
0.58
46365--46412
16
3.1
16
78
6
53
87
0
10
2
0.62
46368--46419
11
4.5
11
83
13
61
84
0
13
1
0.70
46368--46412
21
2.1
22
91
4
74
86
0
11
2
0.65
46373--46412
10
3.9
10
90
6
62
87
0
12
0
0.54
46373--46420
10
4.7
10
89
5
60
83
0
16
0
0.65
46741--46954
113
1.9
115
88
3
326
29
17
10
42
1.82
47248--47299
24
2.2
24
96
0
95
26
25
15
32
1.95
47833--48307
87
5.4
85
77
11
289
33
25
16
25
1.96
47790--48304
132
3.9
132
80
5
542
33
25
15
26
1.95
47788--48303
220
2.3
220
82
6
607
33
25
15
26
1.95
47788--48307
45
11.8
45
80
5
501
33
25
15
25
1.96
49763--49799
19
1.9
19
100
0
74
35
32
10
21
1.88
50048--50105
30
2.0
30
86
3
82
27
17
10
44
1.81
50057--50114
30
1.9
31
92
3
100
24
18
8
48
1.76
50122--50234
30
3.8
29
73
9
84
38
23
6
30
1.80
50122--50210
30
3.0
30
77
8
92
39
21
6
32
1.79
55119--55161
19
2.3
19
84
8
52
13
13
4
67
1.38
55553--55579
9
3.0
9
100
0
54
66
22
0
11
1.22
58737--58783
24
2.0
24
84
8
62
8
8
21
61
1.51
67817--67860
18
2.5
17
85
3
61
27
2
0
70
0.99

Tables:   1

The End!