Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011136.1 Kokia drynarioides strain JFW-HI SEQ_126109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9167

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2045--2079
4
9.0
4
87
6
54
71
0
28
0
0.86
2048--2087
7
5.4
7
88
8
53
67
0
32
0
0.91
2048--2086
11
3.5
11
89
3
51
69
0
30
0
0.89
2078--2115
20
1.9
20
89
10
60
65
0
34
0
0.93
2333--2402
13
5.1
14
72
17
58
31
0
1
67
1.00
2952--3045
47
2.0
46
83
6
118
32
6
8
52
1.57
4153--4242
43
2.1
43
89
4
137
32
10
10
47
1.70
5119--5171
14
3.7
14
82
7
54
45
22
1
30
1.63
5126--5243
36
3.3
34
76
9
119
46
24
1
27
1.62
5151--5193
22
2.0
22
85
0
59
39
23
4
32
1.75
5169--5266
14
6.3
15
70
21
67
48
24
2
24
1.61
5203--5266
29
2.2
29
86
5
85
50
23
1
25
1.58
7467--7513
18
2.6
18
100
0
94
12
31
14
40
1.84
8367--8406
3
13.3
3
100
0
80
32
0
0
67
0.91
8524--8584
24
2.3
27
75
10
65
42
3
1
52
1.27
8530--8585
25
2.3
23
80
17
60
44
3
1
50
1.29
8569--8628
28
2.1
29
84
3
77
43
0
6
50
1.28

Tables:   1

The End!