Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011169.1 Kokia drynarioides strain JFW-HI SEQ_126145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69373

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--87
3
14.7
3
86
8
65
67
0
2
30
1.03
11913--11948
18
2.0
18
88
0
54
22
8
11
58
1.59
12532--12574
3
13.7
3
85
9
59
67
0
2
30
1.03
12797--12862
26
2.6
25
73
4
69
51
4
13
30
1.61
13586--13816
29
7.8
29
69
18
122
35
23
2
38
1.69
13592--13816
59
3.8
59
83
7
251
36
24
2
37
1.68
13602--13816
118
1.8
119
87
7
321
36
23
2
38
1.68
13899--13993
30
3.3
29
70
16
81
35
24
6
33
1.81
13871--14021
29
5.2
28
70
21
71
34
23
7
35
1.82
13607--14231
58
10.8
58
75
9
348
33
24
6
35
1.81
13935--14287
172
2.0
172
93
0
607
31
26
9
32
1.87
14129--14231
29
3.4
29
68
18
77
31
26
7
34
1.85
16132--16170
7
5.6
7
93
0
51
28
7
0
64
1.21
16134--16170
14
2.6
14
91
0
65
29
5
0
64
1.15
17104--17128
8
3.1
8
100
0
50
36
0
0
64
0.94
19587--19623
2
18.5
2
94
0
65
0
48
2
48
1.15
27604--27633
15
2.0
15
100
0
60
26
13
13
46
1.80
29538--29576
11
3.3
12
86
13
55
43
0
7
48
1.31
30438--30494
22
2.7
21
77
2
60
38
3
5
52
1.41
30795--30849
24
2.2
26
83
6
78
65
0
3
30
1.10
30991--31059
36
1.9
36
82
8
88
62
2
1
33
1.19
35583--35644
28
2.2
28
88
2
88
25
12
29
32
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35654--36015
58
6.2
59
76
14
161
36
3
26
33
1.72
35719--36038
29
11.0
28
79
10
286
35
2
26
35
1.71
35755--36026
59
4.7
58
83
7
286
34
2
26
36
1.71
37831--37875
6
7.7
6
80
14
58
51
2
2
44
1.26
37824--37886
23
2.7
23
82
0
81
52
3
1
42
1.27
41465--41514
20
2.5
20
77
6
57
2
26
2
70
1.09
52099--52172
26
2.8
26
97
0
139
37
18
8
35
1.81
52395--53147
368
2.0
369
80
5
835
31
18
16
33
1.93
61793--61822
7
4.3
7
100
0
60
0
13
0
86
0.57
63779--63834
25
2.2
25
93
0
103
44
5
28
21
1.74
65829--65892
33
1.9
33
90
0
101
53
0
4
42
1.22
66004--66037
6
5.7
6
92
0
59
64
0
0
35
0.94
67236--67290
26
2.1
26
86
10
76
54
0
0
45
0.99
68187--68245
29
2.0
30
80
9
68
38
0
5
55
1.22

Tables:   1

The End!