Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011172.1 Kokia drynarioides strain JFW-HI SEQ_126148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38228

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--41
3
13.7
3
100
0
82
65
0
0
34
0.93
80--119
20
2.0
20
85
0
53
52
0
2
45
1.14
1042--1442
29
13.6
30
70
20
224
36
27
2
32
1.72
1026--1453
59
7.3
59
86
4
510
36
27
2
33
1.71
1026--1453
177
2.4
177
89
1
628
36
27
2
33
1.71
1075--1567
59
8.4
56
80
8
260
35
26
4
33
1.76
10655--10712
20
2.9
20
97
0
107
32
0
27
39
1.57
12056--12084
2
14.5
2
100
0
58
51
0
0
48
1.00
16612--16645
14
2.4
14
90
5
50
44
2
0
52
1.16
16595--16660
15
3.7
18
74
15
66
45
1
1
51
1.19
16593--16659
26
2.6
24
76
17
64
44
1
1
52
1.19
27276--27315
10
3.9
11
84
15
59
57
0
0
42
0.98
27701--27741
19
2.2
19
86
8
57
53
2
2
41
1.27
28138--28225
17
5.0
17
78
10
79
38
3
3
54
1.34
28138--28216
37
2.2
35
86
4
104
37
3
3
54
1.37
28891--28957
33
2.0
33
85
5
91
52
7
1
38
1.39
28919--28983
30
2.2
28
83
5
76
55
12
1
30
1.46
30061--30240
60
3.0
60
92
3
294
32
28
5
33
1.80
30073--30255
30
6.2
29
68
13
86
33
28
4
32
1.79
30073--30255
59
3.1
60
87
3
255
33
28
4
32
1.79
30073--30327
118
2.1
119
81
7
286
32
29
6
32
1.82
34652--34714
29
2.2
29
82
0
72
30
17
15
36
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34855--35023
91
1.9
90
80
3
196
28
21
15
34
1.94
37257--37367
9
12.2
9
71
12
50
24
0
9
65
1.22
37254--37359
8
12.0
8
71
21
61
26
0
9
64
1.24
37347--37411
30
2.1
31
82
5
78
23
1
7
67
1.25

Tables:   1

The End!