Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011189.1 Kokia drynarioides strain JFW-HI SEQ_126165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  134491

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1131--1213
4
20.2
4
81
9
96
0
33
0
66
0.92
1131--1213
17
5.3
17
79
16
72
0
33
0
66
0.92
1131--1214
13
6.8
13
78
15
90
0
34
0
65
0.93
3811--3838
3
9.3
3
100
0
56
32
0
0
67
0.91
14642--14678
20
1.9
20
88
5
58
54
0
0
45
1.00
16188--16213
7
3.7
7
100
0
52
88
0
11
0
0.52
21605--21731
63
2.0
63
100
0
254
28
18
20
33
1.96
21849--21878
16
1.9
15
93
6
51
26
0
0
73
0.84
21921--21994
34
2.2
34
87
4
105
40
2
1
55
1.22
22998--23049
6
8.7
6
89
0
68
34
25
15
25
1.95
32582--32613
2
16.0
2
100
0
64
50
0
0
50
1.00
35539--35638
30
3.2
30
67
10
92
56
6
9
29
1.54
35569--35664
30
2.9
34
65
12
92
50
11
12
26
1.74
35538--35664
64
2.0
64
100
0
254
52
9
11
26
1.67
38901--38936
4
9.0
4
100
0
72
0
25
0
75
0.81
40469--40578
52
2.1
53
96
1
204
37
3
18
40
1.68
63239--63276
19
2.0
19
85
10
51
63
0
10
26
1.27
64517--64572
22
2.6
21
74
23
53
35
3
1
58
1.26
64662--64706
19
2.5
17
82
13
54
62
4
2
31
1.27
65153--65680
122
4.3
123
88
1
713
29
19
16
34
1.94
65159--65676
62
8.5
62
85
2
681
29
19
16
34
1.94
65639--65723
43
2.0
43
85
0
116
30
8
12
48
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65577--65779
105
1.9
105
84
3
266
29
13
15
41
1.85
66473--66523
25
1.9
28
84
11
72
45
0
5
49
1.26
69540--69574
12
2.9
12
91
0
52
57
2
2
37
1.29
69675--70073
86
4.6
86
88
5
583
43
5
4
47
1.44
70167--70226
22
2.8
21
83
14
70
35
35
8
21
1.84
72517--72586
30
2.3
30
87
0
95
28
2
4
64
1.27
72517--72621
30
3.6
29
81
8
88
25
4
3
65
1.29
73418--73588
60
2.8
60
85
6
204
39
15
16
28
1.89
73551--73641
47
1.9
47
93
0
155
43
17
12
26
1.84
73491--73700
108
2.0
106
86
6
300
40
17
16
25
1.89
73598--73741
61
2.4
59
84
8
173
40
18
18
23
1.91
96251--96312
27
2.3
27
76
15
65
51
3
1
43
1.27
96695--96724
16
1.9
16
93
6
53
43
6
0
50
1.28
105449--105500
18
2.6
19
80
20
54
51
1
3
42
1.31
112331--112376
20
2.4
19
81
3
56
36
2
2
58
1.22
117243--117302
6
10.3
6
83
3
70
20
1
1
76
0.96
117246--117303
22
2.5
22
86
8
80
22
1
1
74
1.01
117936--118003
8
8.9
8
74
7
61
80
1
13
4
0.92
117934--118010
23
3.3
23
73
7
84
79
2
14
3
0.99
119039--119084
25
1.9
25
86
8
69
32
4
6
56
1.45
120171--120320
71
2.1
71
96
2
277
52
4
3
40
1.37
121396--121434
19
2.0
21
85
10
55
28
10
0
61
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121614--121648
17
2.1
17
100
0
70
51
31
5
11
1.61
121723--121765
18
2.3
19
80
15
54
46
0
0
53
1.00
121735--121777
22
1.9
23
90
4
70
48
0
0
51
1.00
127848--127902
25
2.3
23
79
14
58
38
7
9
45
1.64
127890--127937
20
2.6
18
75
15
53
60
6
2
31
1.33
132591--132621
16
1.9
16
93
0
53
87
6
6
0
0.68

Tables:   1

The End!