Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011217.1 Kokia drynarioides strain JFW-HI SEQ_126195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  128568

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--749
29
5.7
30
75
10
114
37
23
2
35
1.70
584--685
30
3.4
29
77
4
87
36
20
2
40
1.68
673--856
29
6.3
29
74
10
135
40
23
5
29
1.79
695--881
58
3.2
57
80
6
216
39
25
7
28
1.83
695--881
87
2.1
87
84
1
232
39
25
7
28
1.83
979--1044
29
2.3
29
100
0
132
27
27
9
36
1.87
7362--7400
6
6.5
6
87
0
51
23
30
0
46
1.53
21147--21202
13
4.3
14
70
21
50
51
1
1
44
1.22
22739--22782
20
2.2
20
84
8
54
15
2
6
75
1.12
31173--31211
19
2.1
18
85
4
51
23
7
7
61
1.49
34151--34201
23
2.2
23
89
6
77
70
1
1
25
1.08
46991--47060
6
11.3
6
74
6
50
55
20
5
18
1.62
46985--47054
25
2.8
25
80
6
79
54
21
5
18
1.64
46991--47047
19
3.0
19
80
10
55
56
19
7
17
1.64
47380--47502
47
2.6
47
80
8
142
17
2
21
58
1.50
82751--82775
13
1.9
13
100
0
50
12
0
0
88
0.53
85940--85981
18
2.3
18
88
8
59
78
2
2
16
0.96
85955--86003
20
2.5
19
83
12
55
75
4
6
14
1.14
86516--86553
3
12.7
3
100
0
76
34
34
0
31
1.58
88048--88083
7
5.3
7
90
6
56
13
0
61
25
1.33
88048--88083
13
2.7
13
91
4
54
13
0
61
25
1.33
96298--96337
20
2.0
20
90
0
62
35
15
7
42
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96287--96337
20
2.6
19
78
9
57
39
13
7
39
1.74
98230--98356
30
4.2
30
69
13
82
40
0
6
51
1.32
98331--98381
22
2.3
23
79
3
68
50
0
0
49
1.00
106945--106986
2
21.0
2
100
0
84
0
50
0
50
1.00
110728--110762
16
2.1
17
89
5
54
22
14
5
57
1.59
113696--113730
18
1.9
18
94
0
61
57
0
0
42
0.99
115213--115408
42
4.7
42
85
1
254
28
25
18
27
1.98
120662--120761
48
2.1
48
96
0
182
23
26
13
38
1.91
124726--124754
2
14.5
2
100
0
58
51
0
0
48
1.00
127221--127249
10
2.9
10
100
0
58
10
0
20
68
1.18
127460--127653
98
2.0
98
90
2
309
45
14
9
29
1.77

Tables:   1

The End!