Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011227.1 Kokia drynarioides strain JFW-HI SEQ_126205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85611

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4652--4681
8
3.9
8
91
8
53
90
0
0
10
0.47
4653--4681
15
1.9
15
100
0
58
89
0
0
10
0.48
4675--4717
15
2.8
15
85
3
59
79
0
18
2
0.85
4652--4723
36
1.9
37
83
8
92
81
0
12
5
0.84
5026--5294
105
2.6
105
90
1
416
28
19
10
41
1.84
5820--5936
42
2.8
44
82
10
129
41
17
23
17
1.90
6028--6536
94
5.4
93
73
10
413
31
17
27
23
1.97
6118--6828
95
7.4
95
73
9
559
31
17
27
24
1.97
6028--6844
189
4.3
187
81
5
904
31
17
26
24
1.97
6028--6875
385
2.2
378
83
4
999
31
17
26
24
1.97
6930--7371
45
10.0
45
81
4
463
30
23
19
25
1.98
6929--7375
89
5.0
90
82
4
500
30
24
19
25
1.98
7720--7747
3
9.3
3
100
0
56
67
0
0
32
0.91
7842--7868
9
3.0
9
100
0
54
33
33
22
11
1.89
9315--9395
20
3.3
26
75
22
75
28
12
0
59
1.34
9372--9418
21
2.2
21
84
0
58
29
10
2
57
1.44
9501--9548
17
2.8
17
83
3
60
25
4
2
68
1.18
12613--12651
6
6.3
6
91
5
60
61
20
15
2
1.45
17054--17105
21
2.5
21
87
0
77
7
13
32
46
1.72
18609--18653
19
2.4
19
88
0
72
28
28
17
24
1.97
20739--20763
2
12.5
2
100
0
50
48
0
0
52
1.00
21106--21161
18
2.8
20
73
26
57
48
1
0
50
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21171--21211
13
2.9
14
82
17
50
53
2
0
43
1.13
36306--36351
16
2.9
15
81
9
56
13
32
4
50
1.61
51212--51339
67
1.9
67
87
6
190
32
17
8
41
1.80
51347--51397
25
2.0
25
92
0
84
37
13
17
31
1.89
56197--56345
81
1.8
81
82
0
190
30
24
19
24
1.98
64566--64649
29
2.7
32
80
7
93
46
20
1
32
1.58
79931--79987
29
2.0
29
85
0
78
28
1
12
57
1.44
80569--80602
2
17.0
2
100
0
68
50
0
0
50
1.00
80775--80821
24
2.0
24
83
8
60
53
4
2
40
1.32

Tables:   1

The End!