Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011232.1 Kokia drynarioides strain JFW-HI SEQ_126210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115517

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--128
22
2.0
24
86
8
67
31
22
6
40
1.80
265--472
81
2.6
80
86
1
299
33
26
18
21
1.96
8409--8528
58
2.1
58
86
9
165
32
1
18
47
1.58
11612--11654
22
2.0
22
82
17
54
2
6
11
79
1.02
34512--34561
26
1.9
26
95
0
91
26
20
26
28
1.99
38470--38550
38
2.2
37
84
2
108
25
29
20
23
1.99
38645--38702
26
2.3
26
90
3
91
27
18
25
27
1.98
40888--41045
80
2.0
79
87
5
228
34
8
6
50
1.59
42197--42276
30
2.6
31
88
4
108
48
2
1
47
1.23
42199--42239
22
1.9
22
85
5
57
43
4
0
51
1.23
50081--50216
72
1.9
72
98
0
263
38
11
19
31
1.86
59893--59929
3
12.3
3
100
0
74
67
0
0
32
0.91
71282--71358
36
2.1
36
90
0
118
36
24
11
27
1.90
71428--71575
23
6.4
23
92
0
251
46
14
4
35
1.63
78533--78586
28
1.9
28
96
0
99
24
22
5
48
1.72
78670--78713
18
2.4
18
76
0
52
45
2
0
52
1.13
79625--79659
17
2.2
17
90
10
56
51
5
0
42
1.25
80833--80883
25
2.0
25
88
0
75
21
1
7
68
1.25
80868--80928
31
2.0
31
93
0
104
27
16
8
47
1.75
80868--80944
31
2.5
31
87
2
102
28
14
10
46
1.77
81152--81341
61
3.2
60
74
4
177
46
11
16
25
1.79
83700--83742
18
2.4
17
81
11
50
60
2
2
34
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86360--86420
29
2.1
29
81
6
70
31
18
22
27
1.97
86368--86430
29
2.2
29
80
5
74
36
15
22
25
1.94
86438--86747
29
10.8
28
68
18
106
33
3
27
36
1.73
86513--86862
57
6.0
56
75
11
246
34
2
25
37
1.68
86507--86848
29
11.7
28
77
13
273
33
2
26
37
1.68
86536--86822
86
3.3
87
78
10
241
34
1
26
37
1.64
86536--86848
59
5.3
58
81
6
307
34
1
26
37
1.65
87975--88034
3
20.0
3
76
6
59
38
1
1
58
1.18
88778--88835
10
5.8
10
74
22
59
55
3
0
41
1.17
88792--88854
17
3.8
16
85
10
81
53
4
0
41
1.22
88778--88854
6
13.7
6
71
22
60
54
3
0
41
1.19
90990--91028
6
6.5
6
87
0
51
46
0
30
23
1.53
92444--92565
49
2.5
49
91
0
199
22
27
14
35
1.94
92236--92773
257
2.1
256
87
2
758
23
24
16
36
1.94
92493--93152
209
3.2
209
85
0
865
22
22
18
37
1.94
101301--101373
33
2.2
33
90
0
110
19
27
24
28
1.98
103832--103888
3
19.0
3
78
7
62
40
1
0
57
1.09
104627--104685
10
5.9
10
74
21
61
54
3
0
42
1.17
104641--104686
17
2.7
17
90
6
67
52
4
0
43
1.21
104627--104686
6
10.7
6
70
25
51
53
3
0
43
1.17
109056--109080
13
1.9
13
100
0
50
40
4
8
48
1.51
115187--115234
19
2.5
20
75
21
50
45
0
0
54
0.99

Tables:   1

The End!