Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011237.1 Kokia drynarioides strain JFW-HI SEQ_126215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67488

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1786--1844
31
2.0
30
83
6
75
44
13
8
33
1.74
1781--1847
31
2.3
27
78
14
71
41
11
8
37
1.73
3116--3147
17
1.9
17
93
6
57
46
0
0
53
1.00
12918--12965
24
2.0
24
83
0
60
33
0
6
60
1.22
13762--13808
5
10.0
5
86
9
64
80
0
19
0
0.70
13761--13807
14
3.3
15
82
14
55
82
0
17
0
0.66
15358--15409
19
2.9
18
75
10
54
44
3
11
40
1.59
19536--19606
30
2.3
30
75
2
79
46
7
0
46
1.30
21699--21756
31
1.9
31
82
6
75
58
0
6
34
1.25
25338--25373
2
18.0
2
94
0
63
47
0
2
50
1.15
35162--35213
24
2.2
24
85
0
68
61
17
13
7
1.54
38723--38783
26
2.4
25
81
13
70
62
3
1
32
1.21
38726--38778
26
2.0
26
85
10
72
62
1
1
33
1.17
40510--40555
3
15.3
3
100
0
92
67
0
0
32
0.91
42897--42923
2
13.5
2
100
0
54
48
0
51
0
1.00
47466--47592
65
2.0
65
100
0
254
22
11
11
55
1.65
49201--49293
24
3.9
24
94
0
150
25
9
9
54
1.63
51227--51277
24
2.1
24
88
0
75
23
9
9
56
1.61
51235--51289
24
2.3
24
83
0
65
27
12
10
49
1.74
52062--52126
33
2.0
32
88
8
96
40
20
6
33
1.77
57611--57670
32
1.9
32
86
3
86
43
10
11
35
1.75
58774--59412
303
2.1
302
89
0
956
27
10
19
42
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63367--63497
66
2.0
66
98
0
253
23
12
31
32
1.92
65758--65790
2
17.0
2
93
6
59
51
0
0
48
1.00

Tables:   1

The End!