Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011254.1 Kokia drynarioides strain JFW-HI SEQ_126232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39310

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2729--2753
11
2.3
11
100
0
50
48
0
0
52
1.00
2852--2889
18
2.1
18
85
9
51
44
5
5
44
1.49
3054--3088
11
3.2
11
87
0
52
17
0
2
80
0.84
11216--11253
18
2.1
19
85
5
51
36
44
0
18
1.50
11475--11512
18
2.1
19
85
5
51
36
44
0
18
1.50
11060--11584
259
2.0
259
97
0
998
38
22
13
26
1.90
17151--17185
17
2.1
18
89
10
56
48
2
0
48
1.16
18673--19048
30
12.6
30
75
9
279
37
3
24
34
1.73
21293--21354
32
1.9
32
96
0
115
22
24
25
27
2.00
21329--21517
77
2.5
74
81
4
200
25
20
30
23
1.98
21388--22185
39
20.5
39
68
4
322
27
18
29
24
1.98
21491--22061
78
7.3
77
77
6
433
28
18
28
24
1.98
21491--22061
233
2.4
232
80
6
591
28
18
28
24
1.98
21935--22042
38
2.8
39
67
12
96
27
12
31
27
1.93
21640--22139
233
2.1
230
78
9
498
27
18
29
24
1.98
21977--22219
117
2.1
116
82
3
292
27
18
30
23
1.98
26712--26792
39
2.0
40
97
2
155
53
4
14
27
1.62
34241--34640
30
13.4
30
78
6
332
37
1
24
36
1.64
34271--34602
119
2.8
118
83
8
420
37
1
25
35
1.64
34238--34648
149
2.7
146
84
6
504
37
1
24
36
1.66
35641--35700
11
5.6
11
72
21
56
60
1
1
36
1.17

Tables:   1

The End!