Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011258.1 Kokia drynarioides strain JFW-HI SEQ_126237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  131458

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4990--5295
163
1.9
163
97
0
585
28
14
15
42
1.86
7964--8028
17
3.8
17
85
0
94
56
3
3
36
1.30
7968--8046
6
13.7
6
68
7
56
56
2
2
37
1.26
7955--8034
34
2.3
35
82
4
108
58
2
2
36
1.25
8002--8048
17
2.7
17
86
3
58
61
2
0
36
1.08
12223--12264
21
2.0
22
86
13
61
26
2
2
69
1.13
19069--19121
20
2.6
20
85
14
65
58
9
0
32
1.30
19093--19143
26
2.0
26
84
0
66
49
3
0
47
1.20
19135--19181
10
4.7
10
78
7
51
68
2
0
29
1.02
20375--20436
25
2.6
23
76
18
63
72
0
12
14
1.12
21118--21160
20
2.1
20
87
12
61
60
2
2
34
1.22
29120--29406
135
2.1
136
97
0
540
27
11
9
51
1.69
41874--41963
39
2.4
38
86
3
119
41
6
18
33
1.77
42100--42126
2
13.5
2
100
0
54
51
0
0
48
1.00
45609--45633
3
8.3
3
100
0
50
68
0
0
32
0.90
58235--58279
2
22.5
2
100
0
90
51
0
0
48
1.00
63175--63207
2
16.5
2
93
0
57
0
45
0
54
0.99
77294--77336
21
2.0
22
86
4
61
46
2
0
51
1.13
78285--78358
30
2.4
30
86
2
103
43
1
0
55
1.08
79134--79183
21
2.4
21
79
0
55
38
4
22
36
1.73
79140--79205
28
2.4
28
76
0
78
34
4
22
37
1.75
81599--81684
30
2.8
30
83
10
104
72
2
3
22
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85329--85374
24
1.9
24
86
0
65
67
0
2
30
1.03
86027--86052
7
3.7
7
100
0
52
26
0
11
61
1.30
91025--91112
29
2.8
31
81
11
117
43
0
2
54
1.12
92663--92692
3
10.0
3
100
0
60
66
0
0
33
0.92
95418--95464
6
8.2
6
79
9
53
44
2
0
53
1.12
95409--95464
17
3.2
17
87
2
76
44
1
0
53
1.11
95898--95953
28
2.0
28
82
6
69
58
16
8
16
1.61
96560--96656
30
3.2
30
75
5
97
18
24
44
12
1.84
97305--97693
29
13.3
29
74
11
267
37
26
2
33
1.69
97293--97761
58
8.0
57
76
10
344
35
27
2
34
1.72
97319--97759
117
3.8
113
77
9
343
35
26
2
34
1.72
97298--97761
29
15.8
29
75
10
177
35
26
3
34
1.72
102035--102077
22
2.0
21
82
13
52
51
11
23
13
1.74
109559--110036
205
2.3
205
93
0
812
36
20
21
20
1.95
110391--110428
17
2.2
17
90
0
58
50
0
0
50
1.00
110925--110980
28
2.0
28
83
13
71
57
14
10
17
1.65
111561--111655
30
3.2
30
80
1
93
20
25
41
13
1.89
112292--112457
30
5.6
29
82
5
181
37
28
2
31
1.70
112296--112482
59
3.2
58
84
5
232
37
27
2
31
1.71
112393--112556
80
2.0
80
80
9
183
37
26
3
32
1.74
112473--112551
29
2.7
29
83
11
92
35
26
3
34
1.75
114408--114449
21
2.0
21
90
0
66
61
0
0
38
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114480--114535
28
2.0
28
86
10
78
69
3
0
26
1.04
121215--121286
12
5.9
12
75
3
63
70
15
4
9
1.28
121246--121327
24
3.4
23
73
6
65
68
14
7
9
1.39
121783--121819
20
2.0
20
89
10
60
35
8
0
56
1.29
122159--122211
24
2.3
24
84
9
67
32
1
0
66
1.03
123781--123838
22
2.7
21
80
15
73
74
17
5
3
1.15
124819--125096
141
2.0
141
87
1
405
30
23
15
30
1.95
129626--129666
17
2.3
18
91
4
66
19
2
0
78
0.87
129697--129733
4
9.5
4
94
5
67
24
0
0
75
0.80
129627--129800
78
2.3
75
85
8
217
37
0
2
59
1.14
129625--129803
75
2.4
73
81
14
208
37
0
2
59
1.14

Tables:   1

The End!