Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011259.1 Kokia drynarioides strain JFW-HI SEQ_126238, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24687

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--472
13
2.2
13
100
0
58
37
48
6
6
1.57
1647--1740
29
3.2
29
72
11
93
29
6
28
35
1.82
1647--2104
58
7.8
59
82
6
299
33
3
27
35
1.74
1726--2104
29
12.9
30
77
11
333
34
2
26
35
1.71
3225--3277
3
17.3
3
81
11
54
41
0
0
58
0.98
13465--13680
29
7.5
28
87
5
270
33
2
29
34
1.72
15435--15517
6
14.3
6
71
15
59
53
1
1
44
1.16
15440--15517
17
4.6
17
85
0
111
53
1
1
43
1.16
15425--15471
24
2.0
23
87
4
67
51
0
2
46
1.13
16326--16354
14
2.0
15
93
6
51
31
0
0
68
0.89
16643--16694
11
4.5
11
75
15
52
42
0
3
53
1.19
18545--18573
3
9.7
3
100
0
58
31
0
0
68
0.89
19203--19241
16
2.4
17
82
8
53
66
0
0
33
0.92
20735--20912
96
1.9
96
83
7
236
37
12
19
30
1.90
21130--21190
28
2.1
29
84
6
88
29
11
24
34
1.91
21172--21331
58
2.7
57
77
6
160
35
4
27
32
1.77
21208--21307
29
3.5
29
70
12
82
33
6
27
34
1.81
21198--21669
59
8.0
58
81
6
406
33
4
28
34
1.77
21265--21659
29
13.4
29
79
10
378
33
3
28
34
1.75
21169--21670
118
4.3
117
81
7
488
33
4
28
33
1.77
21252--21669
177
2.4
176
85
5
556
33
4
28
33
1.77
23463--23505
6
7.5
6
89
5
54
53
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23465--23521
12
4.9
12
75
16
57
57
1
0
40
1.09
23464--23505
18
2.5
16
88
11
66
54
0
0
45
0.99
23463--23555
17
5.4
17
75
11
91
54
5
0
39
1.23

Tables:   1

The End!