Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011260.1 Kokia drynarioides strain JFW-HI SEQ_126239, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74078

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4624--4660
18
2.1
18
89
0
56
24
27
0
48
1.51
4956--4991
18
2.1
18
89
5
56
33
25
0
41
1.55
12476--12510
17
2.0
18
88
5
54
60
0
0
40
0.97
12467--12514
23
2.1
23
85
11
64
62
0
0
37
0.95
15777--15858
39
2.1
39
100
0
164
53
2
12
31
1.51
23414--23487
37
2.0
37
100
0
148
45
13
16
24
1.83
27676--27718
17
2.5
17
84
0
50
30
30
16
23
1.96
28461--28506
25
1.9
23
86
8
65
32
4
6
56
1.45
34182--34282
3
33.7
3
89
0
157
62
4
0
32
1.17
37418--37460
6
6.8
6
84
10
59
16
4
0
79
0.90
37418--37473
26
2.2
26
83
0
67
14
3
5
76
1.09
38308--38352
13
3.7
12
83
13
56
80
0
11
8
0.92
38332--38379
20
2.4
18
78
21
51
72
0
18
8
1.08
39406--39451
25
1.9
25
86
8
69
32
4
6
56
1.45
41289--41333
23
2.0
23
86
0
63
31
31
13
24
1.93
41299--41355
23
2.5
23
82
5
62
31
26
15
26
1.96
52588--52624
17
2.2
17
90
0
56
10
5
21
62
1.48
52597--52629
17
2.0
17
94
5
59
6
3
30
60
1.36
52744--52791
24
1.9
26
87
8
73
45
0
2
52
1.12
52989--53037
24
2.0
24
88
0
71
24
2
18
55
1.53
55406--55452
18
2.6
18
82
0
58
36
4
34
25
1.76
56206--56257
21
2.5
22
84
9
81
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56213--56261
17
2.7
17
77
22
55
69
0
0
30
0.89
56307--56341
14
2.5
14
90
0
52
48
5
8
37
1.58
63625--63651
11
2.5
11
100
0
54
92
0
7
0
0.38
68853--68886
17
2.0
17
88
0
50
32
14
2
50
1.58
69965--70022
14
4.1
14
71
10
55
44
5
0
50
1.24
70268--70317
22
2.3
21
80
10
55
14
18
52
16
1.76
70772--71005
60
3.9
60
80
8
219
31
17
7
43
1.77
70747--71037
30
9.7
30
74
14
187
32
18
6
42
1.76
70744--71037
90
3.3
89
74
11
253
32
18
6
42
1.76
72608--72636
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!