Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011281.1 Kokia drynarioides strain JFW-HI SEQ_126260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107899

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2199--2333
60
2.3
58
83
9
184
22
14
13
50
1.77
2506--2673
89
1.9
89
80
9
200
48
7
14
29
1.71
6208--6258
3
17.0
3
100
0
102
66
0
0
33
0.92
12413--12444
15
2.1
15
94
0
55
59
3
0
37
1.13
20607--20658
15
3.5
15
75
24
56
11
26
1
59
1.42
21901--21947
9
5.2
9
81
0
58
34
12
44
8
1.73
21886--21949
27
2.4
27
94
0
110
32
9
48
9
1.67
28825--28849
13
1.9
13
100
0
50
88
0
0
12
0.53
30792--30838
25
2.0
23
83
8
58
59
0
4
36
1.17
35598--35636
16
2.6
16
84
15
57
74
0
0
25
0.82
35597--35645
21
2.3
21
80
16
57
69
0
0
30
0.89
35667--35708
21
2.0
22
82
17
54
52
4
2
40
1.35
47037--47154
59
2.0
59
94
0
209
25
29
11
33
1.90
51612--51672
31
2.0
31
87
3
88
29
21
6
42
1.78
56993--57022
15
2.1
15
93
6
53
43
6
0
50
1.28
57363--57398
17
2.1
18
89
5
56
27
2
5
63
1.30
59293--59392
37
2.7
37
98
0
191
43
5
5
47
1.47
72274--72401
39
3.3
39
89
0
193
42
23
17
16
1.89
76182--76437
129
2.0
129
91
1
415
34
26
17
21
1.95
78186--78229
18
2.4
18
85
7
54
31
0
2
65
1.05
84146--84275
65
2.0
65
100
0
260
35
16
24
23
1.95
102970--103078
57
1.9
57
83
1
139
27
12
13
45
1.80

Tables:   1

The End!