Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011291.1 Kokia drynarioides strain JFW-HI SEQ_126270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116653

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
242--272
10
2.9
11
90
9
55
61
0
9
29
1.28
876--1024
23
6.5
23
83
10
141
12
22
22
42
1.86
876--1024
46
3.3
46
81
11
157
12
22
22
42
1.86
8094--8174
30
2.6
31
74
18
80
48
2
1
48
1.23
8250--8299
26
2.0
25
88
4
73
50
6
2
42
1.38
40188--40296
10
11.1
9
69
14
65
33
0
2
63
1.15
40214--40245
9
3.4
10
87
12
50
25
0
0
75
0.81
40188--40323
10
14.0
10
70
19
58
28
1
3
66
1.18
40192--40323
39
3.4
38
75
13
117
27
1
3
67
1.17
40410--40626
90
2.4
88
83
5
256
33
5
17
43
1.72
47526--47562
2
18.5
2
88
0
56
48
5
0
45
1.25
56634--56693
29
2.1
29
87
0
84
45
23
0
31
1.53
56812--56855
23
1.9
23
86
9
63
40
4
9
45
1.56
56948--56987
7
5.3
7
85
14
53
57
0
0
42
0.98
64864--64893
11
2.7
11
100
0
60
20
63
6
10
1.47
66480--66507
3
9.3
3
100
0
56
67
0
32
0
0.91
67412--67465
27
2.0
27
92
0
90
50
0
12
37
1.41
70423--70571
23
6.4
23
82
4
156
45
20
20
12
1.84
73939--74120
95
1.9
95
82
4
224
24
15
12
47
1.81
74351--74450
44
2.3
44
84
6
123
48
8
18
26
1.75
77196--77236
2
21.0
2
95
5
75
48
0
0
51
1.00
87994--88115
57
2.1
57
100
0
244
48
4
29
17
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88484--88518
17
2.1
17
89
10
54
62
0
14
22
1.31
90312--90535
112
2.0
112
100
0
448
41
17
9
30
1.82
96796--96826
6
5.2
6
92
0
53
64
32
3
0
1.09
100675--100711
3
12.3
3
100
0
74
32
0
67
0
0.91
103687--103756
27
2.7
26
80
10
72
40
30
10
20
1.85
103715--103757
13
3.3
12
81
12
50
39
32
9
18
1.83
108304--108393
45
2.0
45
91
0
144
28
4
24
42
1.74
108566--108630
27
2.4
26
83
14
87
56
0
1
41
1.08
109819--109849
2
15.5
2
100
0
62
48
0
0
51
1.00
110291--110316
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!