Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011325.1 Kokia drynarioides strain JFW-HI SEQ_126305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101995

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1906--1931
2
13.0
2
100
0
52
50
0
0
50
1.00
2401--2520
62
1.9
61
90
6
188
40
15
10
33
1.83
2910--2968
24
2.4
25
85
5
75
66
3
0
30
1.08
3211--3290
21
4.1
21
65
22
57
56
0
0
43
0.99
4595--4624
15
2.0
15
93
0
51
56
0
0
43
0.99
7052--7432
87
4.4
87
75
11
349
28
25
14
31
1.95
7199--7340
75
1.9
75
82
0
176
27
23
16
33
1.95
8139--8223
39
2.2
39
85
4
118
12
23
21
42
1.87
9512--9683
85
2.0
84
95
1
308
22
15
13
48
1.79
15792--15838
18
2.6
18
86
0
67
25
34
8
31
1.86
19033--19068
6
6.0
6
100
0
72
16
0
50
33
1.46
21561--21784
91
2.4
91
83
10
247
27
8
4
60
1.44
26845--26883
2
19.5
2
100
0
78
51
0
48
0
1.00
27364--27389
5
5.2
5
100
0
52
61
19
0
19
1.35
27585--27636
23
2.3
23
80
6
63
59
0
5
34
1.21
36220--36244
13
1.9
13
100
0
50
32
0
8
60
1.26
35977--36692
276
2.6
274
83
8
864
32
7
8
51
1.60
37178--37207
11
2.8
11
95
5
53
73
0
0
26
0.84
42024--42062
6
6.3
6
96
3
69
33
0
66
0
0.92
53445--53555
54
2.0
55
91
1
179
19
11
19
48
1.79
54804--54829
3
8.7
3
100
0
52
0
30
0
69
0.89
60667--60738
21
3.2
21
68
24
56
36
6
5
51
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60654--60751
47
2.0
49
90
3
155
37
7
5
50
1.52
80223--80260
18
2.1
18
90
5
58
71
7
0
21
1.11
80432--80499
33
2.1
33
86
5
93
61
5
13
19
1.51
81275--81307
2
17.0
2
87
6
50
51
3
0
45
1.16
90837--90874
18
2.3
16
86
13
51
34
2
28
34
1.71
96871--96918
24
1.9
26
84
16
66
45
0
22
31
1.53
96983--97127
22
6.3
22
87
7
200
11
22
24
42
1.86
96983--97127
47
3.1
47
92
2
233
11
22
24
42
1.86

Tables:   1

The End!