Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011326.1 Kokia drynarioides strain JFW-HI SEQ_126306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70414

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1169--1216
24
1.9
26
84
16
66
45
0
22
31
1.53
1279--1332
23
2.3
23
93
0
90
9
29
22
38
1.85
2343--2375
14
2.4
14
90
5
50
69
0
3
27
1.03
10273--10304
2
16.0
2
100
0
64
50
0
50
0
1.00
16638--16662
2
12.5
2
100
0
50
48
0
0
52
1.00
18035--18075
6
6.7
6
88
2
55
65
0
31
2
1.05
24151--24188
14
2.5
16
79
16
53
44
0
0
55
0.99
24158--24188
14
2.1
15
94
5
55
41
0
0
58
0.98
27096--27152
26
2.2
26
84
6
71
71
0
10
17
1.12
35399--35440
21
2.0
22
85
4
59
45
7
21
26
1.77
35773--35802
15
1.9
16
93
6
53
30
0
6
63
1.20
35860--36144
141
2.0
141
94
0
498
23
10
23
42
1.85
39348--39398
17
2.9
18
80
8
52
43
0
5
50
1.26
40909--41266
29
12.1
29
67
16
112
34
24
3
38
1.71
40946--41208
59
4.4
58
78
9
212
33
22
2
40
1.68
41068--41338
59
4.6
57
78
8
244
35
24
4
35
1.76
41245--41352
29
3.8
29
72
9
87
32
25
6
35
1.82
41010--41338
59
5.6
58
77
9
233
34
23
4
36
1.76
41754--41800
23
2.0
23
95
0
85
21
23
12
42
1.87
42425--42670
94
2.9
82
82
13
330
50
12
7
30
1.68
43502--43566
31
2.1
31
97
0
121
20
10
15
53
1.71
43625--43655
14
2.2
14
94
0
53
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44412--44442
16
1.9
16
93
0
53
48
16
16
19
1.81
44712--44933
58
3.8
59
80
8
215
37
3
23
34
1.73
44766--45078
58
5.3
58
78
5
254
35
3
25
35
1.74
44766--45115
29
12.0
29
71
12
182
34
4
26
35
1.75
44857--45078
117
1.9
116
84
7
295
34
4
25
36
1.75
45035--45144
28
3.8
29
73
15
84
35
4
28
31
1.77
44801--45156
29
12.2
27
71
13
135
34
4
26
34
1.77
45686--45721
16
2.2
16
90
0
54
16
11
0
72
1.12
54400--54441
19
2.2
19
87
8
59
47
4
9
38
1.57
56120--56144
6
4.2
6
100
0
50
68
32
0
0
0.90
63490--63542
27
1.9
27
81
11
63
60
3
13
22
1.49
67765--67806
21
2.0
21
86
4
59
47
0
2
50
1.14

Tables:   1

The End!