Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011334.1 Kokia drynarioides strain JFW-HI SEQ_126314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91511

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9192--9272
41
2.1
38
81
6
90
23
1
12
62
1.36
12038--12097
30
1.9
31
90
6
95
40
10
3
46
1.54
20363--20598
92
2.6
90
82
3
242
38
17
11
32
1.86
21088--21146
29
2.0
30
90
3
93
30
6
16
45
1.74
21260--21343
31
2.8
31
80
3
91
41
14
9
34
1.78
25357--25399
18
2.4
18
88
7
61
53
0
0
46
1.00
28264--28356
48
1.9
48
93
0
159
25
18
19
36
1.94
37064--37097
17
1.9
18
88
5
52
29
5
11
52
1.61
37361--37386
3
8.7
3
100
0
52
65
0
0
34
0.93
42052--42076
13
1.9
13
100
0
50
48
12
16
24
1.79
43160--43190
3
10.7
3
93
6
55
0
32
0
67
0.91
52043--52275
51
4.5
51
87
4
301
29
23
15
31
1.95
59324--59561
51
4.6
51
85
5
293
30
22
13
33
1.92
61865--61937
24
3.1
23
73
9
67
32
16
17
32
1.93
64946--65116
36
4.8
36
83
2
209
31
11
21
35
1.89
65567--65631
23
2.8
23
95
2
112
33
4
15
46
1.66
65619--65661
10
4.2
10
90
3
68
39
2
18
39
1.64
65627--65756
59
2.2
59
91
0
206
37
3
19
40
1.67
66080--66138
29
2.0
29
96
0
109
55
0
15
28
1.40
71110--71166
12
4.5
12
80
14
62
1
22
0
75
0.90
71110--71164
25
2.2
25
84
12
69
1
21
0
76
0.88
71118--71166
18
2.6
19
81
15
57
2
22
0
75
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74083--74121
21
1.9
21
89
5
62
66
7
12
12
1.43
85535--85611
17
4.5
17
93
3
127
12
23
28
35
1.92
86309--86348
21
1.9
21
89
0
62
25
12
20
42
1.86
90488--90521
6
5.7
6
86
13
52
82
0
2
14
0.79
90491--90526
13
2.8
13
91
0
54
80
0
2
16
0.83

Tables:   1

The End!