Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011347.1 Kokia drynarioides strain JFW-HI SEQ_126327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77829

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
779--910
24
5.5
24
86
1
194
28
24
21
25
1.99
779--910
47
2.8
48
85
6
187
28
24
21
25
1.99
892--995
27
3.8
27
90
1
163
36
25
16
22
1.94
1606--1647
20
2.3
19
84
12
52
54
16
9
19
1.69
14068--14107
16
2.5
17
88
8
57
65
0
2
32
1.06
14067--14103
9
4.3
9
80
13
51
67
0
2
29
1.04
22968--22995
10
2.8
10
100
0
56
0
25
0
75
0.81
27166--27193
13
2.2
13
100
0
56
57
0
21
21
1.41
30400--30455
15
3.7
14
79
13
58
71
0
26
1
0.96
30398--30446
18
2.9
17
85
14
66
73
0
24
2
0.94
31342--31490
70
2.1
70
96
0
271
22
22
26
28
1.99
33074--33120
24
2.0
24
95
0
85
29
14
10
44
1.79
38233--38290
21
2.6
23
75
8
57
67
5
15
12
1.39
41519--41573
28
2.0
28
81
0
65
34
23
14
27
1.94
51163--51217
27
2.0
27
100
0
110
27
14
14
43
1.84
59029--59253
114
2.0
114
96
0
414
36
22
19
21
1.95
66705--66788
37
2.3
37
91
0
132
26
32
19
22
1.97
66719--66812
37
2.5
37
82
0
98
31
31
13
22
1.93
66760--66901
37
3.8
38
78
12
107
31
26
14
27
1.94
66804--66901
38
2.6
37
84
7
126
30
24
14
30
1.94
66887--66944
26
2.3
26
87
3
82
29
18
25
25
1.98
67742--67772
16
1.9
16
93
0
53
22
16
0
61
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68020--68050
16
1.9
16
93
0
53
61
0
16
22
1.34
68892--68969
37
2.1
38
88
7
115
30
12
24
32
1.93
71922--71952
16
1.9
16
93
0
53
61
0
16
22
1.34
72383--72408
11
2.4
11
100
0
52
65
0
26
7
1.20
72615--72680
26
2.5
26
95
0
114
33
18
21
27
1.96

Tables:   1

The End!