Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011348.1 Kokia drynarioides strain JFW-HI SEQ_126328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24299

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--167
17
5.6
17
82
2
122
53
3
0
43
1.16
5751--5801
22
2.4
22
83
3
59
50
35
0
13
1.42
10197--10229
15
2.1
16
88
5
50
18
18
9
54
1.69
13094--13171
30
2.6
30
93
0
129
28
29
10
32
1.90
17467--17522
29
1.9
29
85
0
76
33
7
7
51
1.56
18054--18126
19
3.7
19
77
13
67
60
1
1
36
1.14
18071--18147
22
3.8
21
78
8
79
59
1
1
37
1.14
18258--18323
21
3.2
20
82
6
87
72
1
3
22
1.06
18360--18528
87
1.9
88
83
7
218
44
17
5
31
1.73
18730--18793
20
3.2
20
78
12
76
62
4
3
29
1.31
18730--18784
21
2.7
21
86
8
69
61
3
3
30
1.30
18917--18958
17
2.4
17
84
4
57
76
0
0
23
0.79
18968--19023
27
2.1
27
87
12
80
25
5
1
67
1.21
18963--19083
10
12.8
9
70
15
50
25
5
2
66
1.27
19041--19083
19
2.3
19
88
8
61
23
4
0
72
1.04
21482--21565
20
4.3
20
80
6
109
7
4
16
71
1.26
21494--21535
18
2.3
18
95
0
75
11
4
11
71
1.29
21482--21565
38
2.2
40
86
4
118
7
4
16
71
1.26
21562--21635
36
2.1
36
92
0
121
4
5
18
71
1.21
21512--21611
20
4.7
21
75
10
78
5
7
17
71
1.27
21562--21641
12
6.7
12
82
0
88
5
5
18
71
1.23

Tables:   1

The End!