Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011352.1 Kokia drynarioides strain JFW-HI SEQ_126332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63448

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
506--614
11
9.3
12
73
13
84
45
4
1
47
1.33
501--577
25
3.2
25
78
12
63
42
5
0
51
1.24
506--614
6
18.7
6
71
12
84
45
4
1
47
1.33
511--613
17
5.9
17
75
14
86
43
4
1
49
1.35
1347--1392
3
15.0
3
86
4
65
63
4
0
32
1.14
1363--1431
9
7.6
9
80
8
59
55
2
1
40
1.24
2320--2518
29
6.8
29
77
5
193
36
30
1
32
1.67
2316--2519
88
2.3
88
87
0
282
35
30
1
32
1.67
4036--4150
57
2.0
57
100
0
230
44
15
13
26
1.84
4774--4823
22
2.4
22
80
16
61
48
12
0
40
1.40
5733--5788
6
9.2
6
75
11
51
5
16
0
78
0.92
6452--6519
34
2.0
34
100
0
136
47
14
11
26
1.79
26188--26213
2
13.0
2
100
0
52
50
0
0
50
1.00
36836--36902
30
2.2
30
84
7
82
43
8
23
23
1.82
44775--44820
21
2.1
22
88
4
67
63
4
0
32
1.14
44946--44996
26
1.9
26
84
4
66
43
1
0
54
1.11
51833--51878
24
1.9
24
82
8
58
34
6
0
58
1.24
51875--52000
15
8.7
15
65
18
54
46
0
1
51
1.10
51914--52006
31
3.2
30
69
17
79
41
1
2
54
1.19
51884--52016
57
2.3
57
85
6
180
45
0
1
51
1.15
52147--52202
16
3.5
16
90
0
94
28
28
5
37
1.79
54735--54887
74
2.1
74
95
2
272
39
21
3
35
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57186--57431
119
2.1
119
99
0
483
26
25
16
32
1.96
60509--60560
25
2.1
25
100
0
104
32
11
32
23
1.90

Tables:   1

The End!