Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011365.1 Kokia drynarioides strain JFW-HI SEQ_126346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66227

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3135--3171
14
2.6
14
91
4
56
67
2
0
29
1.04
10708--10764
20
2.7
21
82
15
73
33
0
1
64
1.04
29096--29136
18
2.3
19
79
8
50
48
0
4
46
1.23
32827--32967
62
2.2
65
77
9
148
37
8
4
48
1.55
39000--39045
2
23.0
2
95
0
83
52
0
0
47
1.00
40973--40998
3
8.7
3
100
0
52
34
0
0
65
0.93
45395--45525
62
2.2
58
83
8
165
52
10
13
22
1.71
48344--48375
2
17.0
2
87
12
50
53
0
0
46
1.00
52683--52744
21
2.9
21
71
19
56
8
29
3
59
1.42
56883--56907
12
2.1
12
100
0
50
40
36
16
8
1.77
62502--62551
11
4.5
11
77
5
55
10
8
10
72
1.30
63378--63450
17
4.4
17
87
1
103
43
0
2
53
1.15
63383--63450
6
11.8
6
72
20
56
44
0
2
52
1.16
63371--63450
34
2.4
33
87
2
115
45
0
3
51
1.19
63481--63537
15
3.7
15
80
2
69
42
28
14
15
1.86
64136--64181
15
3.1
15
81
6
58
56
0
0
43
0.99
64143--64181
7
5.9
7
85
8
55
56
0
0
43
0.99
65288--65898
59
10.4
59
86
3
788
33
29
4
32
1.78
65288--65898
117
5.2
117
85
3
777
33
29
4
32
1.78
65288--65898
176
3.5
177
88
2
865
33
29
4
32
1.78
65308--65869
29
19.1
28
73
18
273
32
30
4
32
1.78

Tables:   1

The End!