Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011397.1 Kokia drynarioides strain JFW-HI SEQ_126379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23608

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
540--966
29
14.6
29
74
12
329
34
22
2
41
1.66
512--1000
58
8.4
57
79
6
432
34
22
2
40
1.69
540--955
117
3.6
117
83
4
493
34
22
2
40
1.67
962--1071
59
1.9
58
83
3
141
29
25
9
36
1.87
974--1101
59
2.2
59
80
2
141
30
27
10
32
1.90
7238--7292
25
2.2
24
78
15
58
30
1
3
63
1.22
7358--7400
20
2.2
20
86
0
59
13
46
30
9
1.75
7659--7707
25
2.1
22
85
11
62
63
14
10
12
1.53
8446--8833
30
13.1
30
74
10
262
34
25
3
37
1.71
8586--8784
61
3.4
58
79
14
212
35
25
2
36
1.70
8701--8820
29
4.1
28
81
8
98
36
23
2
37
1.68
15790--15932
29
4.9
30
77
9
134
34
0
24
39
1.61
17834--17874
15
2.7
15
81
11
57
7
9
2
80
0.99
18674--18698
13
1.9
13
100
0
50
0
12
0
88
0.53
18968--19005
13
2.9
14
84
11
53
2
13
0
84
0.73
18974--19005
13
2.6
12
90
9
55
0
9
0
90
0.45
23368--23574
30
7.0
29
75
10
161
37
1
20
40
1.64
23368--23577
59
3.6
58
83
5
260
37
1
21
39
1.65
23413--23577
60
2.8
60
88
3
246
35
1
22
40
1.65

Tables:   1

The End!