Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011408.1 Kokia drynarioides strain JFW-HI SEQ_126390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40824

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5040--5122
42
2.0
42
90
4
132
31
0
20
48
1.50
6510--6581
30
2.4
31
86
6
94
50
16
12
20
1.78
9280--9412
57
2.3
56
85
3
178
25
19
6
48
1.71
10332--10388
28
2.0
28
100
0
114
54
31
7
7
1.54
12707--12853
49
3.0
49
98
0
285
53
7
16
23
1.68
12761--12840
23
3.1
27
58
17
62
50
6
18
25
1.70
15659--15879
79
2.8
78
84
2
264
33
27
17
22
1.96
17206--17290
24
3.5
24
85
0
107
25
9
7
57
1.55
19199--19251
24
2.2
24
96
0
97
26
9
7
56
1.57
20135--20165
16
1.9
16
93
0
53
45
3
0
51
1.17
29723--29822
51
2.0
51
91
0
164
25
10
16
49
1.76
32360--32385
7
3.7
7
100
0
52
26
0
26
46
1.53
32395--32445
26
2.0
26
88
7
77
29
9
15
45
1.79
32395--32438
13
3.4
13
78
12
54
27
9
18
45
1.79
32663--32713
26
2.0
26
84
7
68
33
17
7
41
1.79
36144--36184
15
2.5
17
80
11
59
63
0
2
34
1.08
36139--36213
24
3.3
22
74
10
62
52
2
2
42
1.29
39811--39836
12
2.2
12
100
0
52
15
7
15
61
1.55

Tables:   1

The End!