Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011437.1 Kokia drynarioides strain JFW-HI SEQ_126421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91597

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5374--5419
24
1.9
22
83
16
56
45
0
23
30
1.53
5483--5670
23
8.4
23
71
16
126
11
24
21
42
1.86
5483--5625
46
3.1
46
80
6
162
11
25
22
39
1.88
5483--5625
23
6.1
23
75
9
128
11
25
22
39
1.88
5590--5664
39
1.9
39
91
0
123
12
22
21
44
1.85
25945--26012
31
2.2
32
81
7
77
48
1
19
30
1.58
27523--27563
11
3.8
11
87
3
57
53
0
0
46
1.00
30919--31035
61
2.0
61
86
3
166
36
13
12
36
1.83
40841--41029
94
2.0
94
98
0
369
28
18
19
34
1.95
48094--48154
28
2.2
28
82
5
70
50
6
9
32
1.61
51889--51918
3
10.0
3
92
0
51
30
0
36
33
1.58
58072--58106
2
17.5
2
100
0
70
51
0
0
48
1.00
61421--61449
5
6.0
5
92
8
51
41
0
0
58
0.98
79457--79590
73
1.9
71
82
4
171
38
0
5
54
1.30
79893--79917
4
6.2
4
100
0
50
24
0
28
48
1.52
81299--81344
23
2.0
23
83
8
58
10
21
15
52
1.73
84007--84071
33
2.0
33
100
0
130
24
6
32
36
1.80
88430--88495
19
3.5
19
78
13
66
57
0
3
39
1.14
88444--88510
19
3.5
19
82
10
73
61
0
1
37
1.05
88444--88507
10
6.5
10
78
10
69
60
0
1
37
1.06
88634--88684
20
2.6
20
81
12
61
56
1
3
37
1.29
89168--89192
2
12.5
2
100
0
50
0
0
48
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90502--90543
20
2.1
20
86
8
59
11
9
14
64
1.50
90546--90585
12
3.3
12
82
0
53
2
5
22
70
1.19
90536--90585
24
2.1
23
82
10
57
4
6
22
68
1.29
90548--90585
15
2.5
15
83
12
51
2
5
21
71
1.19
90558--90638
22
3.7
21
73
8
63
8
4
18
67
1.35
90526--90585
12
5.1
12
77
4
50
5
6
21
66
1.34

Tables:   1

The End!