Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011451.1 Kokia drynarioides strain JFW-HI SEQ_126435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63523

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--384
22
3.4
22
73
8
68
11
26
20
41
1.87
1061--1117
29
2.0
29
92
0
96
22
21
14
42
1.88
3725--3768
2
22.0
2
100
0
88
50
0
0
50
1.00
5366--5556
96
2.0
95
81
10
219
36
14
19
29
1.91
5910--6308
29
13.6
28
74
15
319
30
5
31
33
1.79
5910--6271
59
6.2
56
81
7
293
30
4
30
33
1.79
5942--6305
88
4.1
88
79
12
367
30
4
31
33
1.79
5959--6305
59
5.9
58
85
6
341
31
4
30
33
1.79
7578--7608
11
2.8
11
100
0
62
19
22
29
29
1.98
7663--7744
6
14.3
6
71
19
68
50
2
1
46
1.22
7665--7744
17
4.7
17
86
6
108
51
2
1
45
1.22
11902--11987
43
2.0
43
95
0
154
34
25
23
16
1.95
14344--14407
24
2.7
24
87
0
92
28
14
7
50
1.70
16323--16373
24
2.1
24
92
0
84
23
11
7
56
1.61
18218--18278
24
2.5
24
86
0
86
26
13
9
50
1.72
21512--21563
25
2.1
25
100
0
104
25
11
15
48
1.78
23079--23134
28
2.0
29
83
16
73
51
12
8
26
1.69
23079--23134
27
2.0
30
83
16
75
51
12
8
26
1.69
34472--34539
34
2.0
34
100
0
136
44
0
11
44
1.40
34728--34767
20
2.0
21
90
5
64
70
2
2
25
1.13
34979--35022
17
2.6
17
85
7
54
43
0
2
54
1.12
42684--42880
25
8.3
25
79
10
166
39
20
26
13
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42719--42886
90
1.8
93
88
3
261
41
22
23
11
1.87
42743--42889
22
6.4
22
77
9
143
40
24
23
10
1.87
43073--43113
21
2.0
21
85
9
57
48
12
0
39
1.41
45767--45826
29
2.1
29
84
6
77
18
26
3
51
1.61
47305--47532
51
4.5
51
81
4
239
33
14
21
30
1.93
49699--49737
15
2.6
15
83
0
51
10
7
0
82
0.86
52474--53083
274
2.2
271
90
2
938
28
24
16
31
1.96
53333--53677
85
4.0
85
84
10
464
44
9
18
27
1.80
54261--54534
85
3.1
85
86
9
361
44
8
17
28
1.78
62426--62483
18
3.4
17
76
9
55
48
12
1
37
1.51
62435--62484
16
3.0
17
75
13
59
50
12
0
38
1.40
62768--62815
20
2.4
21
75
10
55
45
33
2
18
1.61

Tables:   1

The End!