Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011457.1 Kokia drynarioides strain JFW-HI SEQ_126441, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86478

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3014--3524
94
5.5
94
86
6
706
41
6
4
46
1.51
3158--3306
46
3.1
49
63
21
125
42
6
6
44
1.55
3014--3524
177
2.8
178
85
7
639
41
6
4
46
1.51
3356--3505
46
3.2
45
65
11
113
44
8
3
44
1.50
3619--3674
22
2.5
22
82
0
67
44
30
1
23
1.63
4710--4754
20
2.3
19
88
7
72
22
6
6
64
1.41
5969--6015
23
2.0
23
84
8
60
29
4
2
63
1.25
5957--6073
30
4.1
30
76
13
120
26
7
3
62
1.38
6006--6063
24
2.4
24
88
2
80
25
8
3
62
1.40
6909--7699
61
13.1
59
75
10
541
41
13
16
28
1.86
6964--7699
183
4.1
180
78
8
667
41
13
17
28
1.86
14353--14386
5
7.0
5
86
6
52
58
2
0
38
1.13
17218--17242
6
4.2
6
100
0
50
36
32
0
32
1.58
17239--17269
2
15.5
2
100
0
62
48
0
0
51
1.00
17740--17769
3
9.7
3
92
7
51
66
0
0
33
0.92
18255--18300
24
1.9
23
86
8
65
54
4
4
36
1.40
20863--20925
29
2.1
30
82
2
74
28
7
11
52
1.65
23158--23204
3
15.7
3
80
8
51
6
0
65
27
1.16
31537--31583
24
1.9
25
86
4
69
36
17
6
40
1.75
37444--37502
22
2.6
22
82
10
66
18
3
3
74
1.10
41508--41547
21
1.9
21
89
0
62
42
0
2
55
1.13
41781--41826
19
2.3
20
77
3
58
28
8
0
63
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41784--41827
20
2.2
20
84
8
54
27
6
0
65
1.17
41936--41984
19
2.5
21
77
12
59
26
4
4
65
1.29
44164--44198
3
11.7
3
100
0
70
68
0
31
0
0.90
47182--47206
2
12.5
2
100
0
50
0
0
48
52
1.00
52697--52723
2
13.5
2
100
0
54
0
48
0
51
1.00
54549--54617
31
2.2
31
87
5
104
36
18
10
34
1.85
56464--56495
14
2.3
14
94
0
55
31
12
9
46
1.73
57865--58217
29
12.0
29
76
11
292
32
4
28
34
1.78
57847--58209
59
6.2
58
81
7
380
33
4
28
33
1.79
60058--60128
17
4.1
18
74
5
74
53
8
1
36
1.40
62560--62635
35
2.3
33
74
14
77
56
5
0
38
1.22
66902--66937
2
18.0
2
94
0
63
2
50
0
47
1.15
66937--66978
2
21.0
2
90
0
66
50
45
4
0
1.23
76340--76394
24
2.3
24
78
6
58
40
1
10
47
1.49
76379--76548
89
1.9
91
93
2
299
45
5
10
39
1.60
76400--76538
42
3.2
42
70
16
138
46
6
8
38
1.61
77236--77498
55
4.7
55
80
8
296
50
12
7
29
1.67
77279--77497
115
1.9
115
85
3
307
50
13
7
28
1.68
85379--85435
29
1.9
30
85
3
80
28
14
29
28
1.95
85446--85846
29
13.6
29
75
8
253
32
4
28
33
1.79
85429--85512
30
2.8
31
74
13
86
27
5
33
33
1.81
85458--85844
59
6.6
59
79
9
339
32
5
28
33
1.79

Tables:   1

The End!