Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011464.1 Kokia drynarioides strain JFW-HI SEQ_126448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106138

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
300--616
41
7.8
41
81
3
313
19
27
20
32
1.97
333--616
82
3.5
81
83
3
356
19
27
20
32
1.97
3510--3552
17
2.5
18
79
20
56
53
11
13
20
1.71
3545--3581
18
2.1
18
89
0
56
59
10
10
18
1.59
4049--4095
15
2.9
16
81
12
51
6
34
6
53
1.52
9189--9221
3
11.0
3
100
0
66
33
0
0
66
0.92
11406--11512
49
2.2
49
89
3
162
35
9
14
41
1.77
24714--24743
14
2.2
14
94
5
53
36
10
23
30
1.87
27279--27314
12
3.2
12
85
14
51
0
38
0
61
0.96
54195--54234
10
3.8
10
86
6
53
75
2
20
2
1.04
56805--56861
24
2.4
24
87
0
87
26
15
5
52
1.64
73660--73707
10
4.5
11
87
7
64
79
0
20
0
0.74
73661--73707
17
2.9
16
80
20
62
78
0
21
0
0.75
77434--77490
24
2.4
24
96
0
105
26
15
7
50
1.69
77662--78134
235
2.0
236
94
0
840
22
18
12
46
1.83
78809--78882
20
3.6
20
78
9
69
48
8
6
36
1.59
79054--79093
20
1.9
22
90
10
66
42
15
7
35
1.75
85843--85881
19
2.1
19
100
0
78
38
15
10
35
1.81
89213--89245
12
2.6
13
95
4
59
15
0
12
72
1.12
98508--98612
20
5.2
20
72
10
70
47
11
7
33
1.68
99918--99967
18
2.8
18
90
0
82
60
12
8
20
1.57
101032--101061
6
4.8
6
92
8
51
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101032--101074
13
3.4
13
87
9
54
60
2
2
34
1.22
102279--102348
29
2.4
29
82
0
95
25
24
28
21
1.99
102275--102315
18
2.3
18
95
0
73
24
24
29
21
1.99
102271--102350
18
4.8
18
72
20
66
28
23
26
21
1.99
102399--102443
17
2.7
17
93
3
74
15
0
40
44
1.47

Tables:   1

The End!