Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011469.1 Kokia drynarioides strain JFW-HI SEQ_126453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74366

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
730--877
23
6.3
23
85
6
199
11
22
22
42
1.86
730--904
48
3.7
44
82
10
172
11
24
22
42
1.86
730--922
71
2.8
68
85
10
225
11
23
21
42
1.86
7444--7494
26
2.0
26
92
0
84
29
17
25
27
1.98
7596--7685
26
3.4
25
77
8
90
34
16
25
23
1.95
8106--8164
26
2.2
27
82
14
70
23
25
15
35
1.94
9568--9737
85
2.0
84
97
1
322
28
28
17
25
1.97
10887--11124
107
2.2
107
88
1
352
34
23
13
28
1.93
16199--16227
14
2.1
14
100
0
58
17
34
0
48
1.47
20596--20648
21
2.6
19
75
16
52
33
28
9
28
1.88
21346--21584
51
4.6
51
85
4
239
32
21
14
31
1.93
21382--21584
51
4.0
51
87
0
244
32
22
13
31
1.93
27752--27802
26
2.0
26
88
0
75
29
9
25
35
1.88
27912--27967
26
2.2
26
83
3
69
23
16
30
30
1.96
31291--31342
22
2.4
21
81
12
61
17
1
5
75
1.10
31799--32007
110
1.9
110
85
2
285
41
18
11
27
1.86
40028--40078
15
3.2
16
80
8
59
15
0
9
74
1.06
42620--42675
4
14.2
4
81
3
69
28
3
23
44
1.70
42612--42665
8
6.8
8
82
6
56
29
5
22
42
1.76
45051--45106
27
2.1
27
86
6
78
51
8
14
25
1.70
47684--47753
31
2.3
31
100
0
140
41
20
11
27
1.86
47767--47813
21
2.2
21
100
0
94
31
12
25
29
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48225--48251
14
1.9
14
100
0
54
51
14
7
25
1.68
49689--49742
26
2.1
26
100
0
108
31
0
27
40
1.57
50325--50400
32
2.5
31
91
4
127
39
5
14
40
1.68
51787--51953
41
4.1
42
87
10
267
19
8
4
67
1.35
51787--51953
79
2.1
80
93
6
284
19
8
4
67
1.35
64494--64650
75
2.1
75
100
0
314
35
19
19
26
1.95
65092--65145
23
2.4
23
90
3
83
38
33
0
27
1.57
72097--72156
29
2.0
31
84
12
81
30
6
3
60
1.39
72094--72163
29
2.4
28
81
13
79
30
5
2
61
1.34
73636--73664
2
14.5
2
100
0
58
51
0
0
48
1.00
74336--74366
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!