Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011470.1 Kokia drynarioides strain JFW-HI SEQ_126454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56148

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
717--765
18
2.7
19
75
12
57
51
4
2
42
1.32
717--763
17
2.6
18
76
6
51
51
4
2
42
1.33
1372--1407
2
18.5
2
88
5
56
47
0
0
52
1.00
1475--1508
2
17.0
2
93
0
59
47
0
0
52
1.00
1475--1515
10
4.1
10
93
0
55
43
0
0
56
0.99
3274--3299
7
3.7
7
100
0
52
0
0
38
61
0.96
3274--3339
14
4.7
14
76
0
60
13
1
30
54
1.48
7749--7883
42
3.0
46
73
21
128
46
7
2
43
1.44
7771--7862
38
2.4
36
82
12
96
45
6
3
44
1.45
8376--8439
29
2.2
29
100
0
128
37
6
6
50
1.53
8704--8753
15
3.3
15
80
5
64
48
2
0
50
1.12
15384--15438
20
2.9
20
86
10
80
36
3
1
58
1.26
17350--17552
29
7.0
28
79
12
178
34
28
3
33
1.74
17349--17547
59
3.4
60
84
8
241
35
27
3
33
1.74
19606--19668
16
3.9
16
79
8
74
47
0
22
30
1.51
23025--23063
6
6.5
6
87
0
51
46
0
30
23
1.53
23167--23265
38
2.5
40
74
11
105
22
20
28
29
1.98
23191--23269
37
2.1
38
83
2
97
21
20
26
31
1.98
25230--25267
3
12.7
3
94
0
67
31
0
2
65
1.06
28598--28685
46
1.9
46
95
0
158
35
9
10
45
1.70
38529--38591
24
2.7
23
87
7
92
25
11
17
46
1.81
38529--38591
23
2.7
24
87
7
94
25
11
17
46
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40017--40041
6
4.2
6
100
0
50
52
16
32
0
1.44
40797--40834
19
2.0
19
90
10
60
28
5
2
63
1.30
43815--43908
28
3.2
28
62
24
66
26
10
24
38
1.88
43798--43919
61
2.0
61
100
0
244
24
11
26
37
1.89
46848--46873
13
2.0
13
100
0
52
46
7
0
46
1.31
48345--48397
22
2.4
22
77
0
61
35
22
11
30
1.89

Tables:   1

The End!