Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011473.1 Kokia drynarioides strain JFW-HI SEQ_126457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65489

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7248--7296
10
5.0
9
79
16
53
34
30
22
12
1.91
7248--7298
20
2.5
20
84
12
77
35
29
23
11
1.90
11767--11799
10
3.3
10
84
16
50
36
30
24
9
1.86
20456--20509
23
2.3
23
96
0
99
24
25
20
29
1.99
28777--28833
23
2.5
23
94
0
96
22
22
26
28
1.99
34846--34889
22
2.0
22
90
0
70
61
6
2
29
1.34
35786--35810
10
2.5
10
100
0
50
40
0
0
60
0.97
36925--36975
3
17.0
3
91
0
57
66
9
0
23
1.21
39950--40243
148
2.0
147
98
0
561
36
28
17
17
1.92
44888--44963
28
2.7
27
80
8
89
36
9
22
31
1.86
44896--45072
28
6.2
28
78
9
153
31
6
25
36
1.81
45001--45258
29
8.8
29
75
10
184
37
4
20
37
1.72
44996--45258
59
4.5
58
78
10
202
37
4
21
36
1.73
46972--47082
17
6.5
17
82
2
132
54
3
0
40
1.24
46995--47082
11
7.7
11
73
13
63
57
3
0
38
1.15
47614--47713
37
2.7
37
92
0
164
18
24
19
39
1.92
47445--47931
249
2.0
246
87
2
706
22
22
17
36
1.94
47863--47934
37
1.9
37
85
0
99
25
25
16
33
1.96
56223--56269
24
2.0
24
82
0
58
46
8
17
27
1.76
60231--60422
29
6.7
29
73
10
126
35
6
24
33
1.81
60275--60335
28
2.1
30
87
6
90
31
8
24
36
1.85
60231--60422
86
2.2
86
81
6
219
35
6
24
33
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60342--60511
59
2.9
57
81
6
155
37
3
22
37
1.71
60370--60608
59
4.0
58
79
7
223
38
2
21
37
1.67
60361--60605
30
8.3
30
78
9
209
37
2
22
37
1.67
61630--61677
24
2.0
23
88
4
69
37
0
0
62
0.95
62308--62418
17
6.5
17
82
2
132
54
3
0
40
1.24
62331--62418
11
7.7
11
73
13
63
57
3
0
38
1.15
62950--63049
37
2.7
37
92
0
164
18
24
19
39
1.92
62781--63267
249
2.0
246
87
2
706
22
22
17
36
1.94
63199--63270
37
1.9
37
85
0
99
25
25
16
33
1.96

Tables:   1

The End!